Protein–RNA interactions for Protein: Q9Y4C2

TCAF1, TRPM8 channel-associated factor 1, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF1Q9Y4C2 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TCAF1Q9Y4C2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TCAF1Q9Y4C2 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
TCAF1Q9Y4C2 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.59■■□□□ 1.05
TCAF1Q9Y4C2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TCAF1Q9Y4C2 AC244015.2-201ENST00000616358 1861 ntBASIC21.58■■□□□ 1.05
TCAF1Q9Y4C2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.58■■□□□ 1.05
TCAF1Q9Y4C2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TCAF1Q9Y4C2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TCAF1Q9Y4C2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
TCAF1Q9Y4C2 AL034346.1-201ENST00000568244 1277 ntBASIC21.58■■□□□ 1.05
TCAF1Q9Y4C2 AC126544.1-201ENST00000580842 1059 ntBASIC21.58■■□□□ 1.05
TCAF1Q9Y4C2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TCAF1Q9Y4C2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.58■■□□□ 1.05
TCAF1Q9Y4C2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TCAF1Q9Y4C2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.58■■□□□ 1.04
TCAF1Q9Y4C2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.58■■□□□ 1.04
TCAF1Q9Y4C2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
TCAF1Q9Y4C2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TCAF1Q9Y4C2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
TCAF1Q9Y4C2 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TCAF1Q9Y4C2 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TCAF1Q9Y4C2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.57■■□□□ 1.04
TCAF1Q9Y4C2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TCAF1Q9Y4C2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TCAF1Q9Y4C2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.57■■□□□ 1.04
TCAF1Q9Y4C2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TCAF1Q9Y4C2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.57■■□□□ 1.04
TCAF1Q9Y4C2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.57■■□□□ 1.04
TCAF1Q9Y4C2 AC110285.6-201ENST00000617652 491 ntBASIC21.57■■□□□ 1.04
TCAF1Q9Y4C2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
TCAF1Q9Y4C2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TCAF1Q9Y4C2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.57■■□□□ 1.04
TCAF1Q9Y4C2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TCAF1Q9Y4C2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TCAF1Q9Y4C2 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
TCAF1Q9Y4C2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TCAF1Q9Y4C2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.57■■□□□ 1.04
TCAF1Q9Y4C2 AP004607.7-201ENST00000527152 1677 ntBASIC21.56■■□□□ 1.04
TCAF1Q9Y4C2 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.56■■□□□ 1.04
TCAF1Q9Y4C2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
TCAF1Q9Y4C2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TCAF1Q9Y4C2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TCAF1Q9Y4C2 IGHV3-19-201ENST00000521488 291 ntBASIC21.56■■□□□ 1.04
TCAF1Q9Y4C2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.56■■□□□ 1.04
TCAF1Q9Y4C2 AC008764.7-201ENST00000593779 1081 ntBASIC21.56■■□□□ 1.04
TCAF1Q9Y4C2 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.56■■□□□ 1.04
TCAF1Q9Y4C2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TCAF1Q9Y4C2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TCAF1Q9Y4C2 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.56■■□□□ 1.04
TCAF1Q9Y4C2 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TCAF1Q9Y4C2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TCAF1Q9Y4C2 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TCAF1Q9Y4C2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.56■■□□□ 1.04
TCAF1Q9Y4C2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
TCAF1Q9Y4C2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TCAF1Q9Y4C2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TCAF1Q9Y4C2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TCAF1Q9Y4C2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TCAF1Q9Y4C2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TCAF1Q9Y4C2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TCAF1Q9Y4C2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.55■■□□□ 1.04
TCAF1Q9Y4C2 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TCAF1Q9Y4C2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TCAF1Q9Y4C2 AC099791.1-201ENST00000416440 715 ntBASIC21.55■■□□□ 1.04
TCAF1Q9Y4C2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.55■■□□□ 1.04
TCAF1Q9Y4C2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TCAF1Q9Y4C2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
TCAF1Q9Y4C2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.55■■□□□ 1.04
TCAF1Q9Y4C2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TCAF1Q9Y4C2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.55■■□□□ 1.04
TCAF1Q9Y4C2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TCAF1Q9Y4C2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TCAF1Q9Y4C2 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
TCAF1Q9Y4C2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TCAF1Q9Y4C2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.54■■□□□ 1.04
TCAF1Q9Y4C2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
TCAF1Q9Y4C2 EDA-201ENST00000338901 1233 ntBASIC21.54■■□□□ 1.04
TCAF1Q9Y4C2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.54■■□□□ 1.04
TCAF1Q9Y4C2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.54■■□□□ 1.04
TCAF1Q9Y4C2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
TCAF1Q9Y4C2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.54■■□□□ 1.04
TCAF1Q9Y4C2 AP001330.3-201ENST00000520123 633 ntBASIC21.54■■□□□ 1.04
TCAF1Q9Y4C2 AC027682.1-201ENST00000562846 899 ntBASIC21.54■■□□□ 1.04
TCAF1Q9Y4C2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.54■■□□□ 1.04
TCAF1Q9Y4C2 SMUG1P1-201ENST00000590640 811 ntBASIC21.54■■□□□ 1.04
TCAF1Q9Y4C2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.54■■□□□ 1.04
TCAF1Q9Y4C2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.54■■□□□ 1.04
TCAF1Q9Y4C2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.54■■□□□ 1.04
TCAF1Q9Y4C2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TCAF1Q9Y4C2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
TCAF1Q9Y4C2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TCAF1Q9Y4C2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.53■■□□□ 1.04
TCAF1Q9Y4C2 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.53■■□□□ 1.04
TCAF1Q9Y4C2 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TCAF1Q9Y4C2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
TCAF1Q9Y4C2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
TCAF1Q9Y4C2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TCAF1Q9Y4C2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
TCAF1Q9Y4C2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms