Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
MRPS28Q9Y2Q9 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
MRPS28Q9Y2Q9 UNC93B8-201ENST00000511903 705 ntBASIC18.44■□□□□ 0.54
MRPS28Q9Y2Q9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.44■□□□□ 0.54
MRPS28Q9Y2Q9 pRNA.6-201ENST00000610482 90 ntBASIC18.44■□□□□ 0.54
MRPS28Q9Y2Q9 pRNA.5-201ENST00000612139 90 ntBASIC18.44■□□□□ 0.54
MRPS28Q9Y2Q9 pRNA.11-201ENST00000618423 90 ntBASIC18.44■□□□□ 0.54
MRPS28Q9Y2Q9 pRNA.13-201ENST00000619112 90 ntBASIC18.44■□□□□ 0.54
MRPS28Q9Y2Q9 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
MRPS28Q9Y2Q9 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MRPS28Q9Y2Q9 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MRPS28Q9Y2Q9 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MRPS28Q9Y2Q9 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.44■□□□□ 0.54
MRPS28Q9Y2Q9 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.44■□□□□ 0.54
MRPS28Q9Y2Q9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
MRPS28Q9Y2Q9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.44■□□□□ 0.54
MRPS28Q9Y2Q9 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
MRPS28Q9Y2Q9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MRPS28Q9Y2Q9 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.43■□□□□ 0.54
MRPS28Q9Y2Q9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MRPS28Q9Y2Q9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MRPS28Q9Y2Q9 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MRPS28Q9Y2Q9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MRPS28Q9Y2Q9 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MRPS28Q9Y2Q9 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MRPS28Q9Y2Q9 AC006455.2-201ENST00000429931 906 ntBASIC18.43■□□□□ 0.54
MRPS28Q9Y2Q9 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
MRPS28Q9Y2Q9 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.43■□□□□ 0.54
MRPS28Q9Y2Q9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.43■□□□□ 0.54
MRPS28Q9Y2Q9 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.43■□□□□ 0.54
MRPS28Q9Y2Q9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.43■□□□□ 0.54
MRPS28Q9Y2Q9 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
MRPS28Q9Y2Q9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
MRPS28Q9Y2Q9 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
MRPS28Q9Y2Q9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MRPS28Q9Y2Q9 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MRPS28Q9Y2Q9 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.42■□□□□ 0.54
MRPS28Q9Y2Q9 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MRPS28Q9Y2Q9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
MRPS28Q9Y2Q9 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MRPS28Q9Y2Q9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MRPS28Q9Y2Q9 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MRPS28Q9Y2Q9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MRPS28Q9Y2Q9 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.42■□□□□ 0.54
MRPS28Q9Y2Q9 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.42■□□□□ 0.54
MRPS28Q9Y2Q9 AC104564.3-201ENST00000582367 638 ntBASIC18.42■□□□□ 0.54
MRPS28Q9Y2Q9 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MRPS28Q9Y2Q9 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
MRPS28Q9Y2Q9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MRPS28Q9Y2Q9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.42■□□□□ 0.54
MRPS28Q9Y2Q9 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
MRPS28Q9Y2Q9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
MRPS28Q9Y2Q9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
MRPS28Q9Y2Q9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.42■□□□□ 0.54
MRPS28Q9Y2Q9 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MRPS28Q9Y2Q9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRPS28Q9Y2Q9 AC026471.6-201ENST00000622954 1905 ntBASIC18.41■□□□□ 0.54
MRPS28Q9Y2Q9 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MRPS28Q9Y2Q9 FEM1AP4-201ENST00000443167 1987 ntBASIC18.41■□□□□ 0.54
MRPS28Q9Y2Q9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.41■□□□□ 0.54
MRPS28Q9Y2Q9 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRPS28Q9Y2Q9 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRPS28Q9Y2Q9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MRPS28Q9Y2Q9 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
MRPS28Q9Y2Q9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.41■□□□□ 0.54
MRPS28Q9Y2Q9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.41■□□□□ 0.54
MRPS28Q9Y2Q9 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.41■□□□□ 0.54
MRPS28Q9Y2Q9 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.41■□□□□ 0.54
MRPS28Q9Y2Q9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRPS28Q9Y2Q9 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.41■□□□□ 0.54
MRPS28Q9Y2Q9 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
MRPS28Q9Y2Q9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRPS28Q9Y2Q9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
MRPS28Q9Y2Q9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
MRPS28Q9Y2Q9 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRPS28Q9Y2Q9 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
MRPS28Q9Y2Q9 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRPS28Q9Y2Q9 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRPS28Q9Y2Q9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.4■□□□□ 0.54
MRPS28Q9Y2Q9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.4■□□□□ 0.54
MRPS28Q9Y2Q9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
MRPS28Q9Y2Q9 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.4■□□□□ 0.54
MRPS28Q9Y2Q9 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MRPS28Q9Y2Q9 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
MRPS28Q9Y2Q9 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRPS28Q9Y2Q9 AF106564.1-201ENST00000607058 2553 ntBASIC18.4■□□□□ 0.54
MRPS28Q9Y2Q9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRPS28Q9Y2Q9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRPS28Q9Y2Q9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRPS28Q9Y2Q9 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRPS28Q9Y2Q9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRPS28Q9Y2Q9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
MRPS28Q9Y2Q9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.4■□□□□ 0.54
MRPS28Q9Y2Q9 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.4■□□□□ 0.54
MRPS28Q9Y2Q9 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRPS28Q9Y2Q9 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.4■□□□□ 0.54
MRPS28Q9Y2Q9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MRPS28Q9Y2Q9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MRPS28Q9Y2Q9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.4■□□□□ 0.54
MRPS28Q9Y2Q9 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms