Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
NINLQ9Y2I6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
NINLQ9Y2I6 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC29.53■■■□□ 2.32
NINLQ9Y2I6 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC29.52■■■□□ 2.32
NINLQ9Y2I6 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
NINLQ9Y2I6 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
NINLQ9Y2I6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC29.52■■■□□ 2.32
NINLQ9Y2I6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
NINLQ9Y2I6 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC29.52■■■□□ 2.32
NINLQ9Y2I6 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC29.52■■■□□ 2.32
NINLQ9Y2I6 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
NINLQ9Y2I6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC29.52■■■□□ 2.32
NINLQ9Y2I6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC29.52■■■□□ 2.32
NINLQ9Y2I6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC29.52■■■□□ 2.32
NINLQ9Y2I6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC29.52■■■□□ 2.32
NINLQ9Y2I6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC29.52■■■□□ 2.32
NINLQ9Y2I6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC29.52■■■□□ 2.32
NINLQ9Y2I6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC29.51■■■□□ 2.32
NINLQ9Y2I6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
NINLQ9Y2I6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
NINLQ9Y2I6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC29.51■■■□□ 2.31
NINLQ9Y2I6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC29.51■■■□□ 2.31
NINLQ9Y2I6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC29.51■■■□□ 2.31
NINLQ9Y2I6 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
NINLQ9Y2I6 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
NINLQ9Y2I6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
NINLQ9Y2I6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC29.5■■■□□ 2.31
NINLQ9Y2I6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC29.5■■■□□ 2.31
NINLQ9Y2I6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC29.5■■■□□ 2.31
NINLQ9Y2I6 AP001160.3-201ENST00000601484 763 ntBASIC29.5■■■□□ 2.31
NINLQ9Y2I6 UBE2DNL-204ENST00000602536 740 ntBASIC29.5■■■□□ 2.31
NINLQ9Y2I6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC29.5■■■□□ 2.31
NINLQ9Y2I6 COMT-203ENST00000403184 2217 ntTSL 2 BASIC29.5■■■□□ 2.31
NINLQ9Y2I6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
NINLQ9Y2I6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC29.49■■■□□ 2.31
NINLQ9Y2I6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC29.49■■■□□ 2.31
NINLQ9Y2I6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC29.49■■■□□ 2.31
NINLQ9Y2I6 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC29.49■■■□□ 2.31
NINLQ9Y2I6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC29.49■■■□□ 2.31
NINLQ9Y2I6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC29.49■■■□□ 2.31
NINLQ9Y2I6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
NINLQ9Y2I6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC29.49■■■□□ 2.31
NINLQ9Y2I6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC29.49■■■□□ 2.31
NINLQ9Y2I6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
NINLQ9Y2I6 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
NINLQ9Y2I6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC29.49■■■□□ 2.31
NINLQ9Y2I6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
NINLQ9Y2I6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
NINLQ9Y2I6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
NINLQ9Y2I6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC29.48■■■□□ 2.31
NINLQ9Y2I6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
NINLQ9Y2I6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC29.48■■■□□ 2.31
NINLQ9Y2I6 KRT18P20-201ENST00000548986 1279 ntBASIC29.48■■■□□ 2.31
NINLQ9Y2I6 AC011767.1-201ENST00000617410 1153 ntBASIC29.48■■■□□ 2.31
NINLQ9Y2I6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC29.48■■■□□ 2.31
NINLQ9Y2I6 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC29.47■■■□□ 2.31
NINLQ9Y2I6 AC127496.7-201ENST00000625110 1798 ntBASIC29.47■■■□□ 2.31
NINLQ9Y2I6 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
NINLQ9Y2I6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
NINLQ9Y2I6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
NINLQ9Y2I6 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
NINLQ9Y2I6 AC026185.1-201ENST00000445748 174 ntBASIC29.47■■■□□ 2.31
NINLQ9Y2I6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
NINLQ9Y2I6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC29.47■■■□□ 2.31
NINLQ9Y2I6 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC29.47■■■□□ 2.31
NINLQ9Y2I6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
NINLQ9Y2I6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
NINLQ9Y2I6 AC053503.5-201ENST00000601508 636 ntBASIC29.47■■■□□ 2.31
NINLQ9Y2I6 MYCNOS-205ENST00000641950 531 ntBASIC29.47■■■□□ 2.31
NINLQ9Y2I6 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC29.46■■■□□ 2.31
NINLQ9Y2I6 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
NINLQ9Y2I6 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC29.46■■■□□ 2.31
NINLQ9Y2I6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
NINLQ9Y2I6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
NINLQ9Y2I6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC29.46■■■□□ 2.31
NINLQ9Y2I6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC29.46■■■□□ 2.31
NINLQ9Y2I6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC29.46■■■□□ 2.31
NINLQ9Y2I6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
NINLQ9Y2I6 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC29.46■■■□□ 2.31
NINLQ9Y2I6 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
NINLQ9Y2I6 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
NINLQ9Y2I6 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC29.46■■■□□ 2.31
NINLQ9Y2I6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
NINLQ9Y2I6 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
NINLQ9Y2I6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC29.45■■■□□ 2.31
NINLQ9Y2I6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
NINLQ9Y2I6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC29.45■■■□□ 2.31
NINLQ9Y2I6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
NINLQ9Y2I6 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
NINLQ9Y2I6 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.3
NINLQ9Y2I6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC29.44■■■□□ 2.3
NINLQ9Y2I6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC29.44■■■□□ 2.3
NINLQ9Y2I6 MDK-213ENST00000617138 635 ntTSL 2 BASIC29.44■■■□□ 2.3
NINLQ9Y2I6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC29.44■■■□□ 2.3
NINLQ9Y2I6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
NINLQ9Y2I6 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC29.43■■■□□ 2.3
NINLQ9Y2I6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
NINLQ9Y2I6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
NINLQ9Y2I6 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
NINLQ9Y2I6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC29.43■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms