Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHA4Q9UN74 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC24.62■■□□□ 1.53
PCDHA4Q9UN74 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHA4Q9UN74 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHA4Q9UN74 MYB-221ENST00000527615 2381 ntTSL 5 BASIC24.62■■□□□ 1.53
PCDHA4Q9UN74 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHA4Q9UN74 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC24.62■■□□□ 1.53
PCDHA4Q9UN74 PXK-203ENST00000383715 1756 ntTSL 5 BASIC24.62■■□□□ 1.53
PCDHA4Q9UN74 AC009237.3-201ENST00000393279 1427 ntBASIC24.61■■□□□ 1.53
PCDHA4Q9UN74 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHA4Q9UN74 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHA4Q9UN74 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHA4Q9UN74 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHA4Q9UN74 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.61■■□□□ 1.53
PCDHA4Q9UN74 TPRG1LP1-201ENST00000598702 760 ntBASIC24.61■■□□□ 1.53
PCDHA4Q9UN74 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHA4Q9UN74 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
PCDHA4Q9UN74 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHA4Q9UN74 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC24.61■■□□□ 1.53
PCDHA4Q9UN74 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHA4Q9UN74 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC24.6■■□□□ 1.53
PCDHA4Q9UN74 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHA4Q9UN74 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHA4Q9UN74 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
PCDHA4Q9UN74 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
PCDHA4Q9UN74 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
PCDHA4Q9UN74 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC24.6■■□□□ 1.53
PCDHA4Q9UN74 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHA4Q9UN74 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHA4Q9UN74 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC24.6■■□□□ 1.53
PCDHA4Q9UN74 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHA4Q9UN74 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
PCDHA4Q9UN74 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHA4Q9UN74 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHA4Q9UN74 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHA4Q9UN74 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHA4Q9UN74 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
PCDHA4Q9UN74 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHA4Q9UN74 AP006587.3-201ENST00000525742 1516 ntBASIC24.59■■□□□ 1.53
PCDHA4Q9UN74 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
PCDHA4Q9UN74 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHA4Q9UN74 AC005224.4-201ENST00000583262 1652 ntBASIC24.59■■□□□ 1.53
PCDHA4Q9UN74 AC026471.6-201ENST00000622954 1905 ntBASIC24.59■■□□□ 1.53
PCDHA4Q9UN74 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHA4Q9UN74 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHA4Q9UN74 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC24.58■■□□□ 1.53
PCDHA4Q9UN74 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC24.58■■□□□ 1.53
PCDHA4Q9UN74 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHA4Q9UN74 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC24.58■■□□□ 1.53
PCDHA4Q9UN74 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC24.58■■□□□ 1.52
PCDHA4Q9UN74 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHA4Q9UN74 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHA4Q9UN74 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC24.57■■□□□ 1.52
PCDHA4Q9UN74 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHA4Q9UN74 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC24.57■■□□□ 1.52
PCDHA4Q9UN74 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
PCDHA4Q9UN74 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
PCDHA4Q9UN74 SP2-202ENST00000613139 908 ntTSL 5 BASIC24.57■■□□□ 1.52
PCDHA4Q9UN74 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHA4Q9UN74 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHA4Q9UN74 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC24.57■■□□□ 1.52
PCDHA4Q9UN74 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC24.57■■□□□ 1.52
PCDHA4Q9UN74 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC24.56■■□□□ 1.52
PCDHA4Q9UN74 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHA4Q9UN74 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC24.56■■□□□ 1.52
PCDHA4Q9UN74 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
PCDHA4Q9UN74 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC24.56■■□□□ 1.52
PCDHA4Q9UN74 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHA4Q9UN74 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHA4Q9UN74 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
PCDHA4Q9UN74 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHA4Q9UN74 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHA4Q9UN74 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHA4Q9UN74 AC055733.4-201ENST00000638462 1354 ntBASIC24.55■■□□□ 1.52
PCDHA4Q9UN74 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC24.55■■□□□ 1.52
PCDHA4Q9UN74 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHA4Q9UN74 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHA4Q9UN74 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHA4Q9UN74 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHA4Q9UN74 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHA4Q9UN74 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC24.55■■□□□ 1.52
PCDHA4Q9UN74 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHA4Q9UN74 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
PCDHA4Q9UN74 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHA4Q9UN74 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHA4Q9UN74 YBX1P1-201ENST00000445822 960 ntBASIC24.54■■□□□ 1.52
PCDHA4Q9UN74 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC24.54■■□□□ 1.52
PCDHA4Q9UN74 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHA4Q9UN74 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHA4Q9UN74 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC24.54■■□□□ 1.52
PCDHA4Q9UN74 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHA4Q9UN74 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC24.54■■□□□ 1.52
PCDHA4Q9UN74 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC24.53■■□□□ 1.52
PCDHA4Q9UN74 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHA4Q9UN74 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHA4Q9UN74 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHA4Q9UN74 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHA4Q9UN74 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC24.53■■□□□ 1.52
PCDHA4Q9UN74 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHA4Q9UN74 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC24.53■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms