Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
EBF1Q9UH73 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
EBF1Q9UH73 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.88■■□□□ 1.09
EBF1Q9UH73 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.88■■□□□ 1.09
EBF1Q9UH73 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
EBF1Q9UH73 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
EBF1Q9UH73 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.88■■□□□ 1.09
EBF1Q9UH73 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
EBF1Q9UH73 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
EBF1Q9UH73 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
EBF1Q9UH73 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
EBF1Q9UH73 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
EBF1Q9UH73 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
EBF1Q9UH73 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
EBF1Q9UH73 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
EBF1Q9UH73 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
EBF1Q9UH73 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.87■■□□□ 1.09
EBF1Q9UH73 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
EBF1Q9UH73 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
EBF1Q9UH73 KRT87P-202ENST00000534226 1464 ntBASIC21.87■■□□□ 1.09
EBF1Q9UH73 AC009237.3-201ENST00000393279 1427 ntBASIC21.87■■□□□ 1.09
EBF1Q9UH73 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
EBF1Q9UH73 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.86■■□□□ 1.09
EBF1Q9UH73 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
EBF1Q9UH73 AC005224.4-201ENST00000583262 1652 ntBASIC21.86■■□□□ 1.09
EBF1Q9UH73 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.86■■□□□ 1.09
EBF1Q9UH73 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
EBF1Q9UH73 AC083906.2-201ENST00000511578 360 ntBASIC21.86■■□□□ 1.09
EBF1Q9UH73 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.86■■□□□ 1.09
EBF1Q9UH73 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
EBF1Q9UH73 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
EBF1Q9UH73 DUSP8P3-201ENST00000399571 1760 ntBASIC21.86■■□□□ 1.09
EBF1Q9UH73 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
EBF1Q9UH73 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
EBF1Q9UH73 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
EBF1Q9UH73 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
EBF1Q9UH73 TSPY6P-201ENST00000448518 926 ntBASIC21.85■■□□□ 1.09
EBF1Q9UH73 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.85■■□□□ 1.09
EBF1Q9UH73 AC104187.1-201ENST00000607510 612 ntBASIC21.85■■□□□ 1.09
EBF1Q9UH73 AL050303.2-201ENST00000619798 666 ntBASIC21.85■■□□□ 1.09
EBF1Q9UH73 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
EBF1Q9UH73 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
EBF1Q9UH73 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
EBF1Q9UH73 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.84■■□□□ 1.09
EBF1Q9UH73 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
EBF1Q9UH73 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
EBF1Q9UH73 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
EBF1Q9UH73 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
EBF1Q9UH73 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.84■■□□□ 1.09
EBF1Q9UH73 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
EBF1Q9UH73 DUX4L16-201ENST00000555130 1264 ntBASIC21.84■■□□□ 1.09
EBF1Q9UH73 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.84■■□□□ 1.09
EBF1Q9UH73 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.84■■□□□ 1.09
EBF1Q9UH73 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
EBF1Q9UH73 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
EBF1Q9UH73 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
EBF1Q9UH73 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
EBF1Q9UH73 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
EBF1Q9UH73 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
EBF1Q9UH73 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
EBF1Q9UH73 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
EBF1Q9UH73 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.83■■□□□ 1.09
EBF1Q9UH73 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
EBF1Q9UH73 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
EBF1Q9UH73 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.83■■□□□ 1.09
EBF1Q9UH73 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
EBF1Q9UH73 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
EBF1Q9UH73 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.83■■□□□ 1.09
EBF1Q9UH73 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.83■■□□□ 1.09
EBF1Q9UH73 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
EBF1Q9UH73 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
EBF1Q9UH73 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.83■■□□□ 1.09
EBF1Q9UH73 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.83■■□□□ 1.09
EBF1Q9UH73 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.83■■□□□ 1.09
EBF1Q9UH73 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
EBF1Q9UH73 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
EBF1Q9UH73 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
EBF1Q9UH73 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.08
EBF1Q9UH73 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
EBF1Q9UH73 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.82■■□□□ 1.08
EBF1Q9UH73 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
EBF1Q9UH73 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
EBF1Q9UH73 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.82■■□□□ 1.08
EBF1Q9UH73 AC007322.1-201ENST00000426983 750 ntBASIC21.82■■□□□ 1.08
EBF1Q9UH73 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.82■■□□□ 1.08
EBF1Q9UH73 SLC7A5P2-201ENST00000553010 536 ntBASIC21.82■■□□□ 1.08
EBF1Q9UH73 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.82■■□□□ 1.08
EBF1Q9UH73 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.82■■□□□ 1.08
EBF1Q9UH73 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
EBF1Q9UH73 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
EBF1Q9UH73 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.82■■□□□ 1.08
EBF1Q9UH73 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
EBF1Q9UH73 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.81■■□□□ 1.08
EBF1Q9UH73 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
EBF1Q9UH73 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
EBF1Q9UH73 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.81■■□□□ 1.08
EBF1Q9UH73 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
EBF1Q9UH73 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.81■■□□□ 1.08
EBF1Q9UH73 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.81■■□□□ 1.08
EBF1Q9UH73 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms