Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 LINC01960-201ENST00000563759 1884 ntBASIC20.04■□□□□ 0.8
CNIH4Q9P003 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNIH4Q9P003 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.04■□□□□ 0.8
CNIH4Q9P003 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNIH4Q9P003 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNIH4Q9P003 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.04■□□□□ 0.8
CNIH4Q9P003 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.03■□□□□ 0.8
CNIH4Q9P003 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.03■□□□□ 0.8
CNIH4Q9P003 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.03■□□□□ 0.8
CNIH4Q9P003 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNIH4Q9P003 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNIH4Q9P003 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.03■□□□□ 0.8
CNIH4Q9P003 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CNIH4Q9P003 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNIH4Q9P003 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNIH4Q9P003 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNIH4Q9P003 RARRES2P6-201ENST00000567333 442 ntBASIC20.03■□□□□ 0.8
CNIH4Q9P003 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.03■□□□□ 0.8
CNIH4Q9P003 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CNIH4Q9P003 PKD1P6-201ENST00000343738 4769 ntBASIC20.03■□□□□ 0.8
CNIH4Q9P003 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNIH4Q9P003 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CNIH4Q9P003 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNIH4Q9P003 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNIH4Q9P003 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNIH4Q9P003 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CNIH4Q9P003 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNIH4Q9P003 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.02■□□□□ 0.8
CNIH4Q9P003 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.02■□□□□ 0.8
CNIH4Q9P003 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.02■□□□□ 0.8
CNIH4Q9P003 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNIH4Q9P003 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNIH4Q9P003 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNIH4Q9P003 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CNIH4Q9P003 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CNIH4Q9P003 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNIH4Q9P003 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.01■□□□□ 0.79
CNIH4Q9P003 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNIH4Q9P003 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.01■□□□□ 0.79
CNIH4Q9P003 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.01■□□□□ 0.79
CNIH4Q9P003 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNIH4Q9P003 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNIH4Q9P003 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.01■□□□□ 0.79
CNIH4Q9P003 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.01■□□□□ 0.79
CNIH4Q9P003 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNIH4Q9P003 AC012414.1-201ENST00000556676 535 ntBASIC20.01■□□□□ 0.79
CNIH4Q9P003 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.01■□□□□ 0.79
CNIH4Q9P003 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNIH4Q9P003 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CNIH4Q9P003 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNIH4Q9P003 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNIH4Q9P003 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNIH4Q9P003 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNIH4Q9P003 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNIH4Q9P003 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.01■□□□□ 0.79
CNIH4Q9P003 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNIH4Q9P003 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNIH4Q9P003 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20■□□□□ 0.79
CNIH4Q9P003 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNIH4Q9P003 AL137060.1-201ENST00000618151 2648 ntBASIC20■□□□□ 0.79
CNIH4Q9P003 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20■□□□□ 0.79
CNIH4Q9P003 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNIH4Q9P003 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CNIH4Q9P003 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20■□□□□ 0.79
CNIH4Q9P003 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20■□□□□ 0.79
CNIH4Q9P003 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20■□□□□ 0.79
CNIH4Q9P003 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20■□□□□ 0.79
CNIH4Q9P003 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20■□□□□ 0.79
CNIH4Q9P003 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20■□□□□ 0.79
CNIH4Q9P003 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20■□□□□ 0.79
CNIH4Q9P003 AC105233.4-201ENST00000642045 216 ntBASIC20■□□□□ 0.79
CNIH4Q9P003 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20■□□□□ 0.79
CNIH4Q9P003 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20■□□□□ 0.79
CNIH4Q9P003 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CNIH4Q9P003 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CNIH4Q9P003 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20■□□□□ 0.79
CNIH4Q9P003 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNIH4Q9P003 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNIH4Q9P003 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CNIH4Q9P003 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.99■□□□□ 0.79
CNIH4Q9P003 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CNIH4Q9P003 OXCT2P1-201ENST00000447263 1535 ntBASIC19.99■□□□□ 0.79
CNIH4Q9P003 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNIH4Q9P003 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNIH4Q9P003 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.99■□□□□ 0.79
CNIH4Q9P003 AC026271.2-201ENST00000428091 497 ntBASIC19.99■□□□□ 0.79
CNIH4Q9P003 AC097381.1-201ENST00000429019 1296 ntBASIC19.99■□□□□ 0.79
CNIH4Q9P003 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNIH4Q9P003 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CNIH4Q9P003 MIR6821-201ENST00000617625 74 ntBASIC19.99■□□□□ 0.79
CNIH4Q9P003 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CNIH4Q9P003 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.99■□□□□ 0.79
CNIH4Q9P003 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.99■□□□□ 0.79
CNIH4Q9P003 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNIH4Q9P003 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CNIH4Q9P003 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNIH4Q9P003 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.98■□□□□ 0.79
CNIH4Q9P003 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNIH4Q9P003 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CNIH4Q9P003 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms