Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
SPHK1Q9NYA1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPHK1Q9NYA1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPHK1Q9NYA1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SPHK1Q9NYA1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SPHK1Q9NYA1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.73■□□□□ 0.91
SPHK1Q9NYA1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SPHK1Q9NYA1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.73■□□□□ 0.91
SPHK1Q9NYA1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.73■□□□□ 0.91
SPHK1Q9NYA1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SPHK1Q9NYA1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPHK1Q9NYA1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SPHK1Q9NYA1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.73■□□□□ 0.91
SPHK1Q9NYA1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPHK1Q9NYA1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.72■□□□□ 0.91
SPHK1Q9NYA1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPHK1Q9NYA1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPHK1Q9NYA1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
SPHK1Q9NYA1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.72■□□□□ 0.91
SPHK1Q9NYA1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.72■□□□□ 0.91
SPHK1Q9NYA1 KRT18P5-201ENST00000436075 1291 ntBASIC20.72■□□□□ 0.91
SPHK1Q9NYA1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPHK1Q9NYA1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.72■□□□□ 0.91
SPHK1Q9NYA1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SPHK1Q9NYA1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.72■□□□□ 0.91
SPHK1Q9NYA1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.72■□□□□ 0.91
SPHK1Q9NYA1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPHK1Q9NYA1 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPHK1Q9NYA1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPHK1Q9NYA1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SPHK1Q9NYA1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPHK1Q9NYA1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SPHK1Q9NYA1 AC055733.4-201ENST00000638462 1354 ntBASIC20.72■□□□□ 0.91
SPHK1Q9NYA1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SPHK1Q9NYA1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPHK1Q9NYA1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.71■□□□□ 0.91
SPHK1Q9NYA1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SPHK1Q9NYA1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.71■□□□□ 0.91
SPHK1Q9NYA1 AL034346.1-201ENST00000568244 1277 ntBASIC20.71■□□□□ 0.91
SPHK1Q9NYA1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.71■□□□□ 0.91
SPHK1Q9NYA1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.71■□□□□ 0.91
SPHK1Q9NYA1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.71■□□□□ 0.91
SPHK1Q9NYA1 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.71■□□□□ 0.91
SPHK1Q9NYA1 AC242852.2-201ENST00000615738 1807 ntBASIC20.71■□□□□ 0.91
SPHK1Q9NYA1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SPHK1Q9NYA1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SPHK1Q9NYA1 AC012676.1-201ENST00000574705 1949 ntBASIC20.7■□□□□ 0.91
SPHK1Q9NYA1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPHK1Q9NYA1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPHK1Q9NYA1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPHK1Q9NYA1 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPHK1Q9NYA1 AC092053.2-201ENST00000640557 1818 ntBASIC20.7■□□□□ 0.9
SPHK1Q9NYA1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPHK1Q9NYA1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPHK1Q9NYA1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPHK1Q9NYA1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPHK1Q9NYA1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPHK1Q9NYA1 KRT18P61-201ENST00000585825 1298 ntBASIC20.7■□□□□ 0.9
SPHK1Q9NYA1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.7■□□□□ 0.9
SPHK1Q9NYA1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPHK1Q9NYA1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPHK1Q9NYA1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.7■□□□□ 0.9
SPHK1Q9NYA1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPHK1Q9NYA1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPHK1Q9NYA1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPHK1Q9NYA1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.69■□□□□ 0.9
SPHK1Q9NYA1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SPHK1Q9NYA1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPHK1Q9NYA1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SPHK1Q9NYA1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.69■□□□□ 0.9
SPHK1Q9NYA1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.69■□□□□ 0.9
SPHK1Q9NYA1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.69■□□□□ 0.9
SPHK1Q9NYA1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.69■□□□□ 0.9
SPHK1Q9NYA1 NTF6G-201ENST00000591094 616 ntBASIC20.69■□□□□ 0.9
SPHK1Q9NYA1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SPHK1Q9NYA1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SPHK1Q9NYA1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.69■□□□□ 0.9
SPHK1Q9NYA1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPHK1Q9NYA1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPHK1Q9NYA1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.69■□□□□ 0.9
SPHK1Q9NYA1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SPHK1Q9NYA1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.69■□□□□ 0.9
SPHK1Q9NYA1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPHK1Q9NYA1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.69■□□□□ 0.9
SPHK1Q9NYA1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPHK1Q9NYA1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.68■□□□□ 0.9
SPHK1Q9NYA1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.68■□□□□ 0.9
SPHK1Q9NYA1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPHK1Q9NYA1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPHK1Q9NYA1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SPHK1Q9NYA1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.68■□□□□ 0.9
SPHK1Q9NYA1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.68■□□□□ 0.9
SPHK1Q9NYA1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.68■□□□□ 0.9
SPHK1Q9NYA1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPHK1Q9NYA1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPHK1Q9NYA1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPHK1Q9NYA1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SPHK1Q9NYA1 AP006587.3-201ENST00000525742 1516 ntBASIC20.68■□□□□ 0.9
SPHK1Q9NYA1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SPHK1Q9NYA1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms