Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HCFC1R1Q9NWW0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
HCFC1R1Q9NWW0 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
HCFC1R1Q9NWW0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
HCFC1R1Q9NWW0 KLF13-207ENST00000560473 489 ntTSL 3 BASIC22.45■■□□□ 1.18
HCFC1R1Q9NWW0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC22.45■■□□□ 1.18
HCFC1R1Q9NWW0 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
HCFC1R1Q9NWW0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
HCFC1R1Q9NWW0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HCFC1R1Q9NWW0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HCFC1R1Q9NWW0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
HCFC1R1Q9NWW0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HCFC1R1Q9NWW0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.44■■□□□ 1.18
HCFC1R1Q9NWW0 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.44■■□□□ 1.18
HCFC1R1Q9NWW0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.44■■□□□ 1.18
HCFC1R1Q9NWW0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.44■■□□□ 1.18
HCFC1R1Q9NWW0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.44■■□□□ 1.18
HCFC1R1Q9NWW0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.44■■□□□ 1.18
HCFC1R1Q9NWW0 AC010536.3-201ENST00000620306 533 ntBASIC22.44■■□□□ 1.18
HCFC1R1Q9NWW0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
HCFC1R1Q9NWW0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.43■■□□□ 1.18
HCFC1R1Q9NWW0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HCFC1R1Q9NWW0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.43■■□□□ 1.18
HCFC1R1Q9NWW0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HCFC1R1Q9NWW0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HCFC1R1Q9NWW0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HCFC1R1Q9NWW0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HCFC1R1Q9NWW0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
HCFC1R1Q9NWW0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
HCFC1R1Q9NWW0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC22.42■■□□□ 1.18
HCFC1R1Q9NWW0 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.42■■□□□ 1.18
HCFC1R1Q9NWW0 TSPY20P-201ENST00000450910 630 ntBASIC22.42■■□□□ 1.18
HCFC1R1Q9NWW0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC22.42■■□□□ 1.18
HCFC1R1Q9NWW0 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
HCFC1R1Q9NWW0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
HCFC1R1Q9NWW0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
HCFC1R1Q9NWW0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HCFC1R1Q9NWW0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.42■■□□□ 1.18
HCFC1R1Q9NWW0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
HCFC1R1Q9NWW0 SLC29A4P1-201ENST00000398760 971 ntBASIC22.41■■□□□ 1.18
HCFC1R1Q9NWW0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
HCFC1R1Q9NWW0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC22.41■■□□□ 1.18
HCFC1R1Q9NWW0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC22.41■■□□□ 1.18
HCFC1R1Q9NWW0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.41■■□□□ 1.18
HCFC1R1Q9NWW0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
HCFC1R1Q9NWW0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
HCFC1R1Q9NWW0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.41■■□□□ 1.18
HCFC1R1Q9NWW0 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
HCFC1R1Q9NWW0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
HCFC1R1Q9NWW0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.4■■□□□ 1.18
HCFC1R1Q9NWW0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
HCFC1R1Q9NWW0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC22.4■■□□□ 1.18
HCFC1R1Q9NWW0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
HCFC1R1Q9NWW0 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.4■■□□□ 1.18
HCFC1R1Q9NWW0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.4■■□□□ 1.18
HCFC1R1Q9NWW0 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC22.4■■□□□ 1.18
HCFC1R1Q9NWW0 KRT18P20-201ENST00000548986 1279 ntBASIC22.4■■□□□ 1.18
HCFC1R1Q9NWW0 KRT18P6-201ENST00000555540 1265 ntBASIC22.4■■□□□ 1.18
HCFC1R1Q9NWW0 AC098934.4-201ENST00000564127 592 ntBASIC22.4■■□□□ 1.18
HCFC1R1Q9NWW0 AC105036.2-201ENST00000569468 176 ntBASIC22.4■■□□□ 1.18
HCFC1R1Q9NWW0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC22.4■■□□□ 1.18
HCFC1R1Q9NWW0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
HCFC1R1Q9NWW0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.4■■□□□ 1.18
HCFC1R1Q9NWW0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
HCFC1R1Q9NWW0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.4■■□□□ 1.18
HCFC1R1Q9NWW0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
HCFC1R1Q9NWW0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
HCFC1R1Q9NWW0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.39■■□□□ 1.18
HCFC1R1Q9NWW0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.39■■□□□ 1.18
HCFC1R1Q9NWW0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
HCFC1R1Q9NWW0 AF201337.1-201ENST00000520239 748 ntBASIC22.39■■□□□ 1.17
HCFC1R1Q9NWW0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.39■■□□□ 1.17
HCFC1R1Q9NWW0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
HCFC1R1Q9NWW0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
HCFC1R1Q9NWW0 TMEM191A-211ENST00000637163 1067 ntBASIC22.39■■□□□ 1.17
HCFC1R1Q9NWW0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC22.39■■□□□ 1.17
HCFC1R1Q9NWW0 AP006587.3-201ENST00000525742 1516 ntBASIC22.39■■□□□ 1.17
HCFC1R1Q9NWW0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.39■■□□□ 1.17
HCFC1R1Q9NWW0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
HCFC1R1Q9NWW0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
HCFC1R1Q9NWW0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HCFC1R1Q9NWW0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.38■■□□□ 1.17
HCFC1R1Q9NWW0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
HCFC1R1Q9NWW0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.38■■□□□ 1.17
HCFC1R1Q9NWW0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HCFC1R1Q9NWW0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
HCFC1R1Q9NWW0 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.38■■□□□ 1.17
HCFC1R1Q9NWW0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.38■■□□□ 1.17
HCFC1R1Q9NWW0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
HCFC1R1Q9NWW0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
HCFC1R1Q9NWW0 EEF1DP3-203ENST00000566025 782 ntBASIC22.38■■□□□ 1.17
HCFC1R1Q9NWW0 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
HCFC1R1Q9NWW0 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
HCFC1R1Q9NWW0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.38■■□□□ 1.17
HCFC1R1Q9NWW0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.38■■□□□ 1.17
HCFC1R1Q9NWW0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
HCFC1R1Q9NWW0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HCFC1R1Q9NWW0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HCFC1R1Q9NWW0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HCFC1R1Q9NWW0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms