Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 BX005040.4-201ENST00000637145 1518 ntBASIC20.3■□□□□ 0.84
PRDM9Q9NQV7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
PRDM9Q9NQV7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRDM9Q9NQV7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRDM9Q9NQV7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRDM9Q9NQV7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRDM9Q9NQV7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRDM9Q9NQV7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRDM9Q9NQV7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
PRDM9Q9NQV7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRDM9Q9NQV7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRDM9Q9NQV7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRDM9Q9NQV7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRDM9Q9NQV7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRDM9Q9NQV7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRDM9Q9NQV7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRDM9Q9NQV7 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRDM9Q9NQV7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRDM9Q9NQV7 AC026271.2-201ENST00000428091 497 ntBASIC20.29■□□□□ 0.84
PRDM9Q9NQV7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PRDM9Q9NQV7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRDM9Q9NQV7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRDM9Q9NQV7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRDM9Q9NQV7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRDM9Q9NQV7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRDM9Q9NQV7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.28■□□□□ 0.84
PRDM9Q9NQV7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRDM9Q9NQV7 EP400NL-214ENST00000641289 2402 ntBASIC20.28■□□□□ 0.84
PRDM9Q9NQV7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRDM9Q9NQV7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PRDM9Q9NQV7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRDM9Q9NQV7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRDM9Q9NQV7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRDM9Q9NQV7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRDM9Q9NQV7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PRDM9Q9NQV7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRDM9Q9NQV7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRDM9Q9NQV7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.27■□□□□ 0.84
PRDM9Q9NQV7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRDM9Q9NQV7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.27■□□□□ 0.84
PRDM9Q9NQV7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.27■□□□□ 0.84
PRDM9Q9NQV7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRDM9Q9NQV7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.27■□□□□ 0.84
PRDM9Q9NQV7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
PRDM9Q9NQV7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.27■□□□□ 0.84
PRDM9Q9NQV7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.27■□□□□ 0.84
PRDM9Q9NQV7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRDM9Q9NQV7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.27■□□□□ 0.84
PRDM9Q9NQV7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PRDM9Q9NQV7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRDM9Q9NQV7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.26■□□□□ 0.83
PRDM9Q9NQV7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.26■□□□□ 0.83
PRDM9Q9NQV7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRDM9Q9NQV7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
PRDM9Q9NQV7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRDM9Q9NQV7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.26■□□□□ 0.83
PRDM9Q9NQV7 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.26■□□□□ 0.83
PRDM9Q9NQV7 LINC02228-203ENST00000641970 1355 ntBASIC20.26■□□□□ 0.83
PRDM9Q9NQV7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRDM9Q9NQV7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PRDM9Q9NQV7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.26■□□□□ 0.83
PRDM9Q9NQV7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.26■□□□□ 0.83
PRDM9Q9NQV7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.26■□□□□ 0.83
PRDM9Q9NQV7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PRDM9Q9NQV7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PRDM9Q9NQV7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.26■□□□□ 0.83
PRDM9Q9NQV7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PRDM9Q9NQV7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PRDM9Q9NQV7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRDM9Q9NQV7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRDM9Q9NQV7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRDM9Q9NQV7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRDM9Q9NQV7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.26■□□□□ 0.83
PRDM9Q9NQV7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
PRDM9Q9NQV7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRDM9Q9NQV7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.25■□□□□ 0.83
PRDM9Q9NQV7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PRDM9Q9NQV7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRDM9Q9NQV7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRDM9Q9NQV7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRDM9Q9NQV7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRDM9Q9NQV7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRDM9Q9NQV7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.25■□□□□ 0.83
PRDM9Q9NQV7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.25■□□□□ 0.83
PRDM9Q9NQV7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRDM9Q9NQV7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.25■□□□□ 0.83
PRDM9Q9NQV7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.24■□□□□ 0.83
PRDM9Q9NQV7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PRDM9Q9NQV7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRDM9Q9NQV7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PRDM9Q9NQV7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PRDM9Q9NQV7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRDM9Q9NQV7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PRDM9Q9NQV7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.24■□□□□ 0.83
PRDM9Q9NQV7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.24■□□□□ 0.83
PRDM9Q9NQV7 TPRG1LP1-201ENST00000598702 760 ntBASIC20.24■□□□□ 0.83
PRDM9Q9NQV7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.24■□□□□ 0.83
PRDM9Q9NQV7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.24■□□□□ 0.83
PRDM9Q9NQV7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRDM9Q9NQV7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms