Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SIX2Q9NPC8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.14■■□□□ 1.29
SIX2Q9NPC8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SIX2Q9NPC8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.14■■□□□ 1.29
SIX2Q9NPC8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SIX2Q9NPC8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
SIX2Q9NPC8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SIX2Q9NPC8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
SIX2Q9NPC8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.14■■□□□ 1.29
SIX2Q9NPC8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SIX2Q9NPC8 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.14■■□□□ 1.29
SIX2Q9NPC8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.13■■□□□ 1.29
SIX2Q9NPC8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
SIX2Q9NPC8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
SIX2Q9NPC8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SIX2Q9NPC8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SIX2Q9NPC8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.13■■□□□ 1.29
SIX2Q9NPC8 SMUG1P1-201ENST00000590640 811 ntBASIC23.13■■□□□ 1.29
SIX2Q9NPC8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SIX2Q9NPC8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SIX2Q9NPC8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
SIX2Q9NPC8 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.13■■□□□ 1.29
SIX2Q9NPC8 AP004607.7-201ENST00000527152 1677 ntBASIC23.13■■□□□ 1.29
SIX2Q9NPC8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.12■■□□□ 1.29
SIX2Q9NPC8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.12■■□□□ 1.29
SIX2Q9NPC8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SIX2Q9NPC8 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.12■■□□□ 1.29
SIX2Q9NPC8 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SIX2Q9NPC8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SIX2Q9NPC8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SIX2Q9NPC8 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.12■■□□□ 1.29
SIX2Q9NPC8 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.12■■□□□ 1.29
SIX2Q9NPC8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC23.12■■□□□ 1.29
SIX2Q9NPC8 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
SIX2Q9NPC8 AC110285.6-201ENST00000617652 491 ntBASIC23.12■■□□□ 1.29
SIX2Q9NPC8 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SIX2Q9NPC8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.11■■□□□ 1.29
SIX2Q9NPC8 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
SIX2Q9NPC8 Z98882.1-201ENST00000622160 2253 ntBASIC23.11■■□□□ 1.29
SIX2Q9NPC8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SIX2Q9NPC8 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
SIX2Q9NPC8 AC106739.1-201ENST00000617035 715 ntBASIC23.11■■□□□ 1.29
SIX2Q9NPC8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SIX2Q9NPC8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SIX2Q9NPC8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.11■■□□□ 1.29
SIX2Q9NPC8 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC23.11■■□□□ 1.29
SIX2Q9NPC8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SIX2Q9NPC8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.1■■□□□ 1.29
SIX2Q9NPC8 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
SIX2Q9NPC8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
SIX2Q9NPC8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SIX2Q9NPC8 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SIX2Q9NPC8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
SIX2Q9NPC8 PBX2P1-201ENST00000493219 1291 ntBASIC23.1■■□□□ 1.29
SIX2Q9NPC8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.1■■□□□ 1.29
SIX2Q9NPC8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.1■■□□□ 1.29
SIX2Q9NPC8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SIX2Q9NPC8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.1■■□□□ 1.29
SIX2Q9NPC8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.1■■□□□ 1.29
SIX2Q9NPC8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SIX2Q9NPC8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SIX2Q9NPC8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SIX2Q9NPC8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
SIX2Q9NPC8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SIX2Q9NPC8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.09■■□□□ 1.29
SIX2Q9NPC8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23.09■■□□□ 1.29
SIX2Q9NPC8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SIX2Q9NPC8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.09■■□□□ 1.29
SIX2Q9NPC8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.09■■□□□ 1.29
SIX2Q9NPC8 AC008764.7-201ENST00000593779 1081 ntBASIC23.09■■□□□ 1.29
SIX2Q9NPC8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.09■■□□□ 1.29
SIX2Q9NPC8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SIX2Q9NPC8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SIX2Q9NPC8 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SIX2Q9NPC8 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.08■■□□□ 1.29
SIX2Q9NPC8 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.08■■□□□ 1.29
SIX2Q9NPC8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SIX2Q9NPC8 IGHV3-19-201ENST00000521488 291 ntBASIC23.08■■□□□ 1.29
SIX2Q9NPC8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.08■■□□□ 1.29
SIX2Q9NPC8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.08■■□□□ 1.29
SIX2Q9NPC8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SIX2Q9NPC8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.08■■□□□ 1.29
SIX2Q9NPC8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SIX2Q9NPC8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SIX2Q9NPC8 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SIX2Q9NPC8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SIX2Q9NPC8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC23.07■■□□□ 1.28
SIX2Q9NPC8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
SIX2Q9NPC8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SIX2Q9NPC8 AC003102.1-202ENST00000563394 1796 ntBASIC23.07■■□□□ 1.28
SIX2Q9NPC8 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.07■■□□□ 1.28
SIX2Q9NPC8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
SIX2Q9NPC8 AC099791.1-201ENST00000416440 715 ntBASIC23.07■■□□□ 1.28
SIX2Q9NPC8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SIX2Q9NPC8 AP001330.3-201ENST00000520123 633 ntBASIC23.07■■□□□ 1.28
SIX2Q9NPC8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.07■■□□□ 1.28
SIX2Q9NPC8 AL034346.1-201ENST00000568244 1277 ntBASIC23.07■■□□□ 1.28
SIX2Q9NPC8 AC126544.1-201ENST00000580842 1059 ntBASIC23.07■■□□□ 1.28
SIX2Q9NPC8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.07■■□□□ 1.28
SIX2Q9NPC8 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms