Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GCM1Q9NP62 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GCM1Q9NP62 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GCM1Q9NP62 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GCM1Q9NP62 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
GCM1Q9NP62 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
GCM1Q9NP62 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GCM1Q9NP62 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GCM1Q9NP62 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.29■□□□□ 0.52
GCM1Q9NP62 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GCM1Q9NP62 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.29■□□□□ 0.52
GCM1Q9NP62 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.29■□□□□ 0.52
GCM1Q9NP62 MIR6084-201ENST00000622012 110 ntBASIC18.29■□□□□ 0.52
GCM1Q9NP62 AC139530.1-201ENST00000575312 1977 ntBASIC18.29■□□□□ 0.52
GCM1Q9NP62 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GCM1Q9NP62 OR7E47P-201ENST00000546390 1422 ntBASIC18.29■□□□□ 0.52
GCM1Q9NP62 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
GCM1Q9NP62 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GCM1Q9NP62 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GCM1Q9NP62 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GCM1Q9NP62 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.29■□□□□ 0.52
GCM1Q9NP62 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GCM1Q9NP62 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.28■□□□□ 0.52
GCM1Q9NP62 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GCM1Q9NP62 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
GCM1Q9NP62 AC027612.3-201ENST00000413684 1047 ntBASIC18.28■□□□□ 0.52
GCM1Q9NP62 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.28■□□□□ 0.52
GCM1Q9NP62 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.28■□□□□ 0.52
GCM1Q9NP62 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.28■□□□□ 0.52
GCM1Q9NP62 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.28■□□□□ 0.52
GCM1Q9NP62 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.28■□□□□ 0.52
GCM1Q9NP62 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
GCM1Q9NP62 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GCM1Q9NP62 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
GCM1Q9NP62 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.28■□□□□ 0.52
GCM1Q9NP62 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GCM1Q9NP62 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GCM1Q9NP62 AC233723.2-201ENST00000623798 2106 ntBASIC18.28■□□□□ 0.52
GCM1Q9NP62 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GCM1Q9NP62 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.27■□□□□ 0.52
GCM1Q9NP62 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GCM1Q9NP62 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GCM1Q9NP62 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.27■□□□□ 0.52
GCM1Q9NP62 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GCM1Q9NP62 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GCM1Q9NP62 MIR935-201ENST00000401179 91 ntBASIC18.27■□□□□ 0.52
GCM1Q9NP62 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.27■□□□□ 0.52
GCM1Q9NP62 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.27■□□□□ 0.52
GCM1Q9NP62 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.27■□□□□ 0.52
GCM1Q9NP62 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GCM1Q9NP62 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.27■□□□□ 0.52
GCM1Q9NP62 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.27■□□□□ 0.52
GCM1Q9NP62 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GCM1Q9NP62 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GCM1Q9NP62 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GCM1Q9NP62 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.26■□□□□ 0.51
GCM1Q9NP62 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
GCM1Q9NP62 AC080038.3-201ENST00000623346 1952 ntBASIC18.26■□□□□ 0.51
GCM1Q9NP62 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GCM1Q9NP62 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.26■□□□□ 0.51
GCM1Q9NP62 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
GCM1Q9NP62 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.26■□□□□ 0.51
GCM1Q9NP62 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GCM1Q9NP62 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GCM1Q9NP62 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GCM1Q9NP62 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GCM1Q9NP62 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.26■□□□□ 0.51
GCM1Q9NP62 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GCM1Q9NP62 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GCM1Q9NP62 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
GCM1Q9NP62 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
GCM1Q9NP62 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GCM1Q9NP62 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GCM1Q9NP62 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GCM1Q9NP62 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.25■□□□□ 0.51
GCM1Q9NP62 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GCM1Q9NP62 BX005040.4-201ENST00000637145 1518 ntBASIC18.25■□□□□ 0.51
GCM1Q9NP62 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GCM1Q9NP62 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.25■□□□□ 0.51
GCM1Q9NP62 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
GCM1Q9NP62 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GCM1Q9NP62 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
GCM1Q9NP62 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
GCM1Q9NP62 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GCM1Q9NP62 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.24■□□□□ 0.51
GCM1Q9NP62 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GCM1Q9NP62 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GCM1Q9NP62 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
GCM1Q9NP62 YBX1P1-201ENST00000445822 960 ntBASIC18.24■□□□□ 0.51
GCM1Q9NP62 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.24■□□□□ 0.51
GCM1Q9NP62 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GCM1Q9NP62 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GCM1Q9NP62 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.23■□□□□ 0.51
GCM1Q9NP62 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
GCM1Q9NP62 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.23■□□□□ 0.51
GCM1Q9NP62 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
GCM1Q9NP62 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
GCM1Q9NP62 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GCM1Q9NP62 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GCM1Q9NP62 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms