Protein–RNA interactions for Protein: Q9HBF4

ZFYVE1, Zinc finger FYVE domain-containing protein 1, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1Q9HBF4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZFYVE1Q9HBF4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZFYVE1Q9HBF4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.51■■□□□ 1.03
ZFYVE1Q9HBF4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZFYVE1Q9HBF4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZFYVE1Q9HBF4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZFYVE1Q9HBF4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
ZFYVE1Q9HBF4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZFYVE1Q9HBF4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZFYVE1Q9HBF4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ZFYVE1Q9HBF4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZFYVE1Q9HBF4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ZFYVE1Q9HBF4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.5■■□□□ 1.03
ZFYVE1Q9HBF4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
ZFYVE1Q9HBF4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.5■■□□□ 1.03
ZFYVE1Q9HBF4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.5■■□□□ 1.03
ZFYVE1Q9HBF4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.5■■□□□ 1.03
ZFYVE1Q9HBF4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ZFYVE1Q9HBF4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.5■■□□□ 1.03
ZFYVE1Q9HBF4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.5■■□□□ 1.03
ZFYVE1Q9HBF4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
ZFYVE1Q9HBF4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
ZFYVE1Q9HBF4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.5■■□□□ 1.03
ZFYVE1Q9HBF4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.5■■□□□ 1.03
ZFYVE1Q9HBF4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ZFYVE1Q9HBF4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZFYVE1Q9HBF4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
ZFYVE1Q9HBF4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.49■■□□□ 1.03
ZFYVE1Q9HBF4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
ZFYVE1Q9HBF4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ZFYVE1Q9HBF4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.49■■□□□ 1.03
ZFYVE1Q9HBF4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZFYVE1Q9HBF4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZFYVE1Q9HBF4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.49■■□□□ 1.03
ZFYVE1Q9HBF4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZFYVE1Q9HBF4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZFYVE1Q9HBF4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZFYVE1Q9HBF4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZFYVE1Q9HBF4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZFYVE1Q9HBF4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZFYVE1Q9HBF4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ZFYVE1Q9HBF4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.48■■□□□ 1.03
ZFYVE1Q9HBF4 YBX1P1-201ENST00000445822 960 ntBASIC21.48■■□□□ 1.03
ZFYVE1Q9HBF4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.48■■□□□ 1.03
ZFYVE1Q9HBF4 TPRG1LP1-201ENST00000598702 760 ntBASIC21.48■■□□□ 1.03
ZFYVE1Q9HBF4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ZFYVE1Q9HBF4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZFYVE1Q9HBF4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
ZFYVE1Q9HBF4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ZFYVE1Q9HBF4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZFYVE1Q9HBF4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZFYVE1Q9HBF4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ZFYVE1Q9HBF4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZFYVE1Q9HBF4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZFYVE1Q9HBF4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.47■■□□□ 1.03
ZFYVE1Q9HBF4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.47■■□□□ 1.03
ZFYVE1Q9HBF4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ZFYVE1Q9HBF4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
ZFYVE1Q9HBF4 AC123595.1-201ENST00000440769 1046 ntBASIC21.47■■□□□ 1.03
ZFYVE1Q9HBF4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZFYVE1Q9HBF4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.47■■□□□ 1.03
ZFYVE1Q9HBF4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ZFYVE1Q9HBF4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZFYVE1Q9HBF4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.47■■□□□ 1.03
ZFYVE1Q9HBF4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
ZFYVE1Q9HBF4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ZFYVE1Q9HBF4 AC005224.4-201ENST00000583262 1652 ntBASIC21.47■■□□□ 1.03
ZFYVE1Q9HBF4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZFYVE1Q9HBF4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
ZFYVE1Q9HBF4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZFYVE1Q9HBF4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZFYVE1Q9HBF4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZFYVE1Q9HBF4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.46■■□□□ 1.03
ZFYVE1Q9HBF4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
ZFYVE1Q9HBF4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.46■■□□□ 1.03
ZFYVE1Q9HBF4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
ZFYVE1Q9HBF4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.46■■□□□ 1.03
ZFYVE1Q9HBF4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.46■■□□□ 1.03
ZFYVE1Q9HBF4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
ZFYVE1Q9HBF4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZFYVE1Q9HBF4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZFYVE1Q9HBF4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ZFYVE1Q9HBF4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.03
ZFYVE1Q9HBF4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
ZFYVE1Q9HBF4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.45■■□□□ 1.03
ZFYVE1Q9HBF4 FAM99A-202ENST00000538190 1989 ntBASIC21.45■■□□□ 1.02
ZFYVE1Q9HBF4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.02
ZFYVE1Q9HBF4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZFYVE1Q9HBF4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
ZFYVE1Q9HBF4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZFYVE1Q9HBF4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
ZFYVE1Q9HBF4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZFYVE1Q9HBF4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZFYVE1Q9HBF4 C11orf96-202ENST00000528572 1834 ntBASIC21.45■■□□□ 1.02
ZFYVE1Q9HBF4 LINC02228-203ENST00000641970 1355 ntBASIC21.45■■□□□ 1.02
ZFYVE1Q9HBF4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZFYVE1Q9HBF4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.45■■□□□ 1.02
ZFYVE1Q9HBF4 AP006587.3-201ENST00000525742 1516 ntBASIC21.45■■□□□ 1.02
ZFYVE1Q9HBF4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZFYVE1Q9HBF4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms