Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
POLR1BQ9H9Y6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
POLR1BQ9H9Y6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
POLR1BQ9H9Y6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
POLR1BQ9H9Y6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
POLR1BQ9H9Y6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
POLR1BQ9H9Y6 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.13■□□□□ 0.97
POLR1BQ9H9Y6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
POLR1BQ9H9Y6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
POLR1BQ9H9Y6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
POLR1BQ9H9Y6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
POLR1BQ9H9Y6 CDCA4P2-201ENST00000441182 718 ntBASIC21.13■□□□□ 0.97
POLR1BQ9H9Y6 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.13■□□□□ 0.97
POLR1BQ9H9Y6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.13■□□□□ 0.97
POLR1BQ9H9Y6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
POLR1BQ9H9Y6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
POLR1BQ9H9Y6 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
POLR1BQ9H9Y6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR1BQ9H9Y6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR1BQ9H9Y6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.12■□□□□ 0.97
POLR1BQ9H9Y6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR1BQ9H9Y6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
POLR1BQ9H9Y6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.12■□□□□ 0.97
POLR1BQ9H9Y6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR1BQ9H9Y6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.12■□□□□ 0.97
POLR1BQ9H9Y6 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.12■□□□□ 0.97
POLR1BQ9H9Y6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.12■□□□□ 0.97
POLR1BQ9H9Y6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.12■□□□□ 0.97
POLR1BQ9H9Y6 KRT18P61-201ENST00000585825 1298 ntBASIC21.12■□□□□ 0.97
POLR1BQ9H9Y6 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.12■□□□□ 0.97
POLR1BQ9H9Y6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR1BQ9H9Y6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.12■□□□□ 0.97
POLR1BQ9H9Y6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
POLR1BQ9H9Y6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.12■□□□□ 0.97
POLR1BQ9H9Y6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
POLR1BQ9H9Y6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.12■□□□□ 0.97
POLR1BQ9H9Y6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
POLR1BQ9H9Y6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
POLR1BQ9H9Y6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR1BQ9H9Y6 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
POLR1BQ9H9Y6 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR1BQ9H9Y6 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
POLR1BQ9H9Y6 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
POLR1BQ9H9Y6 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
POLR1BQ9H9Y6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.11■□□□□ 0.97
POLR1BQ9H9Y6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.11■□□□□ 0.97
POLR1BQ9H9Y6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
POLR1BQ9H9Y6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.11■□□□□ 0.97
POLR1BQ9H9Y6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.11■□□□□ 0.97
POLR1BQ9H9Y6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
POLR1BQ9H9Y6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
POLR1BQ9H9Y6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
POLR1BQ9H9Y6 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
POLR1BQ9H9Y6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
POLR1BQ9H9Y6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
POLR1BQ9H9Y6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
POLR1BQ9H9Y6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.1■□□□□ 0.97
POLR1BQ9H9Y6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.1■□□□□ 0.97
POLR1BQ9H9Y6 LINC01529-204ENST00000636474 1715 ntBASIC21.1■□□□□ 0.97
POLR1BQ9H9Y6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
POLR1BQ9H9Y6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.1■□□□□ 0.97
POLR1BQ9H9Y6 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
POLR1BQ9H9Y6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
POLR1BQ9H9Y6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
POLR1BQ9H9Y6 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.1■□□□□ 0.97
POLR1BQ9H9Y6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
POLR1BQ9H9Y6 AC026185.1-201ENST00000445748 174 ntBASIC21.1■□□□□ 0.97
POLR1BQ9H9Y6 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.1■□□□□ 0.97
POLR1BQ9H9Y6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.1■□□□□ 0.97
POLR1BQ9H9Y6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.1■□□□□ 0.97
POLR1BQ9H9Y6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
POLR1BQ9H9Y6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.1■□□□□ 0.97
POLR1BQ9H9Y6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
POLR1BQ9H9Y6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
POLR1BQ9H9Y6 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
POLR1BQ9H9Y6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
POLR1BQ9H9Y6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
POLR1BQ9H9Y6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
POLR1BQ9H9Y6 SLC25A24-204ENST00000569674 2357 ntBASIC21.09■□□□□ 0.97
POLR1BQ9H9Y6 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
POLR1BQ9H9Y6 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
POLR1BQ9H9Y6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
POLR1BQ9H9Y6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.09■□□□□ 0.97
POLR1BQ9H9Y6 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.09■□□□□ 0.97
POLR1BQ9H9Y6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.09■□□□□ 0.97
POLR1BQ9H9Y6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.09■□□□□ 0.97
POLR1BQ9H9Y6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.09■□□□□ 0.97
POLR1BQ9H9Y6 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.09■□□□□ 0.97
POLR1BQ9H9Y6 TPRG1LP1-201ENST00000598702 760 ntBASIC21.09■□□□□ 0.97
POLR1BQ9H9Y6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
POLR1BQ9H9Y6 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
POLR1BQ9H9Y6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
POLR1BQ9H9Y6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
POLR1BQ9H9Y6 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
POLR1BQ9H9Y6 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
POLR1BQ9H9Y6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
POLR1BQ9H9Y6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
POLR1BQ9H9Y6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
POLR1BQ9H9Y6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.08■□□□□ 0.97
POLR1BQ9H9Y6 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms