Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.24■■□□□ 1.15
BRD9Q9H8M2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
BRD9Q9H8M2 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.24■■□□□ 1.15
BRD9Q9H8M2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
BRD9Q9H8M2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
BRD9Q9H8M2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
BRD9Q9H8M2 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
BRD9Q9H8M2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.24■■□□□ 1.15
BRD9Q9H8M2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.24■■□□□ 1.15
BRD9Q9H8M2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.24■■□□□ 1.15
BRD9Q9H8M2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
BRD9Q9H8M2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.23■■□□□ 1.15
BRD9Q9H8M2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
BRD9Q9H8M2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
BRD9Q9H8M2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
BRD9Q9H8M2 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
BRD9Q9H8M2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
BRD9Q9H8M2 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
BRD9Q9H8M2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.23■■□□□ 1.15
BRD9Q9H8M2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC22.23■■□□□ 1.15
BRD9Q9H8M2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.23■■□□□ 1.15
BRD9Q9H8M2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
BRD9Q9H8M2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
BRD9Q9H8M2 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
BRD9Q9H8M2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.23■■□□□ 1.15
BRD9Q9H8M2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
BRD9Q9H8M2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
BRD9Q9H8M2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.22■■□□□ 1.15
BRD9Q9H8M2 GUSBP6-202ENST00000438529 1198 ntBASIC22.22■■□□□ 1.15
BRD9Q9H8M2 AL138781.1-201ENST00000566567 1274 ntBASIC22.22■■□□□ 1.15
BRD9Q9H8M2 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC22.22■■□□□ 1.15
BRD9Q9H8M2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
BRD9Q9H8M2 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
BRD9Q9H8M2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.22■■□□□ 1.15
BRD9Q9H8M2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
BRD9Q9H8M2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
BRD9Q9H8M2 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
BRD9Q9H8M2 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
BRD9Q9H8M2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
BRD9Q9H8M2 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC22.21■■□□□ 1.15
BRD9Q9H8M2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.21■■□□□ 1.15
BRD9Q9H8M2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
BRD9Q9H8M2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
BRD9Q9H8M2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC22.21■■□□□ 1.15
BRD9Q9H8M2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC22.21■■□□□ 1.15
BRD9Q9H8M2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
BRD9Q9H8M2 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC22.21■■□□□ 1.15
BRD9Q9H8M2 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
BRD9Q9H8M2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
BRD9Q9H8M2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.15
BRD9Q9H8M2 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
BRD9Q9H8M2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.2■■□□□ 1.15
BRD9Q9H8M2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
BRD9Q9H8M2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.2■■□□□ 1.15
BRD9Q9H8M2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
BRD9Q9H8M2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.2■■□□□ 1.14
BRD9Q9H8M2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
BRD9Q9H8M2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.2■■□□□ 1.14
BRD9Q9H8M2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.2■■□□□ 1.14
BRD9Q9H8M2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC22.2■■□□□ 1.14
BRD9Q9H8M2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.2■■□□□ 1.14
BRD9Q9H8M2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC22.2■■□□□ 1.14
BRD9Q9H8M2 AC055733.4-201ENST00000638462 1354 ntBASIC22.2■■□□□ 1.14
BRD9Q9H8M2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
BRD9Q9H8M2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
BRD9Q9H8M2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
BRD9Q9H8M2 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
BRD9Q9H8M2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.19■■□□□ 1.14
BRD9Q9H8M2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
BRD9Q9H8M2 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
BRD9Q9H8M2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
BRD9Q9H8M2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
BRD9Q9H8M2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
BRD9Q9H8M2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.19■■□□□ 1.14
BRD9Q9H8M2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.19■■□□□ 1.14
BRD9Q9H8M2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
BRD9Q9H8M2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
BRD9Q9H8M2 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
BRD9Q9H8M2 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
BRD9Q9H8M2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
BRD9Q9H8M2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
BRD9Q9H8M2 DUSP8P5-201ENST00000422884 1815 ntBASIC22.18■■□□□ 1.14
BRD9Q9H8M2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
BRD9Q9H8M2 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
BRD9Q9H8M2 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC22.18■■□□□ 1.14
BRD9Q9H8M2 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.18■■□□□ 1.14
BRD9Q9H8M2 AF201337.1-201ENST00000520239 748 ntBASIC22.18■■□□□ 1.14
BRD9Q9H8M2 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC22.18■■□□□ 1.14
BRD9Q9H8M2 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
BRD9Q9H8M2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
BRD9Q9H8M2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.18■■□□□ 1.14
BRD9Q9H8M2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
BRD9Q9H8M2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
BRD9Q9H8M2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
BRD9Q9H8M2 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
BRD9Q9H8M2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC22.17■■□□□ 1.14
BRD9Q9H8M2 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
BRD9Q9H8M2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.16■■□□□ 1.14
BRD9Q9H8M2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
BRD9Q9H8M2 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms