Protein–RNA interactions for Protein: Q9H3W5

LRRN3, Leucine-rich repeat neuronal protein 3, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRN3Q9H3W5 MIR663A-201ENST00000385250 93 ntBASIC20.8■□□□□ 0.92
LRRN3Q9H3W5 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRRN3Q9H3W5 NCF1B-203ENST00000435988 1254 ntBASIC20.8■□□□□ 0.92
LRRN3Q9H3W5 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.8■□□□□ 0.92
LRRN3Q9H3W5 MFSD11-216ENST00000590393 1141 ntBASIC20.8■□□□□ 0.92
LRRN3Q9H3W5 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRN3Q9H3W5 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRRN3Q9H3W5 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRRN3Q9H3W5 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRRN3Q9H3W5 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRN3Q9H3W5 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRN3Q9H3W5 LINC01960-201ENST00000563759 1884 ntBASIC20.79■□□□□ 0.92
LRRN3Q9H3W5 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.79■□□□□ 0.92
LRRN3Q9H3W5 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRN3Q9H3W5 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRN3Q9H3W5 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRN3Q9H3W5 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LRRN3Q9H3W5 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRN3Q9H3W5 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LRRN3Q9H3W5 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.79■□□□□ 0.92
LRRN3Q9H3W5 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRN3Q9H3W5 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.79■□□□□ 0.92
LRRN3Q9H3W5 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRN3Q9H3W5 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.79■□□□□ 0.92
LRRN3Q9H3W5 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.78■□□□□ 0.92
LRRN3Q9H3W5 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRN3Q9H3W5 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRN3Q9H3W5 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRN3Q9H3W5 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRN3Q9H3W5 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRN3Q9H3W5 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.78■□□□□ 0.92
LRRN3Q9H3W5 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRN3Q9H3W5 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRN3Q9H3W5 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.77■□□□□ 0.92
LRRN3Q9H3W5 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRRN3Q9H3W5 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.77■□□□□ 0.92
LRRN3Q9H3W5 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.77■□□□□ 0.92
LRRN3Q9H3W5 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.77■□□□□ 0.92
LRRN3Q9H3W5 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRRN3Q9H3W5 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
LRRN3Q9H3W5 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.77■□□□□ 0.91
LRRN3Q9H3W5 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
LRRN3Q9H3W5 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
LRRN3Q9H3W5 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LRRN3Q9H3W5 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LRRN3Q9H3W5 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LRRN3Q9H3W5 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.76■□□□□ 0.91
LRRN3Q9H3W5 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
LRRN3Q9H3W5 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRN3Q9H3W5 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
LRRN3Q9H3W5 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRN3Q9H3W5 AC055733.4-201ENST00000638462 1354 ntBASIC20.76■□□□□ 0.91
LRRN3Q9H3W5 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRRN3Q9H3W5 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRN3Q9H3W5 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRRN3Q9H3W5 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRN3Q9H3W5 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.76■□□□□ 0.91
LRRN3Q9H3W5 GPX1P1-201ENST00000388829 606 ntBASIC20.76■□□□□ 0.91
LRRN3Q9H3W5 AL355802.2-201ENST00000402069 882 ntBASIC20.76■□□□□ 0.91
LRRN3Q9H3W5 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.76■□□□□ 0.91
LRRN3Q9H3W5 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.76■□□□□ 0.91
LRRN3Q9H3W5 AP001160.3-201ENST00000601484 763 ntBASIC20.76■□□□□ 0.91
LRRN3Q9H3W5 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.76■□□□□ 0.91
LRRN3Q9H3W5 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
LRRN3Q9H3W5 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.76■□□□□ 0.91
LRRN3Q9H3W5 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRN3Q9H3W5 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRRN3Q9H3W5 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.76■□□□□ 0.91
LRRN3Q9H3W5 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRN3Q9H3W5 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRRN3Q9H3W5 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRN3Q9H3W5 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRN3Q9H3W5 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
LRRN3Q9H3W5 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRRN3Q9H3W5 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
LRRN3Q9H3W5 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.75■□□□□ 0.91
LRRN3Q9H3W5 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.75■□□□□ 0.91
LRRN3Q9H3W5 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.75■□□□□ 0.91
LRRN3Q9H3W5 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.75■□□□□ 0.91
LRRN3Q9H3W5 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.75■□□□□ 0.91
LRRN3Q9H3W5 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.75■□□□□ 0.91
LRRN3Q9H3W5 UBE2DNL-204ENST00000602536 740 ntBASIC20.75■□□□□ 0.91
LRRN3Q9H3W5 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.75■□□□□ 0.91
LRRN3Q9H3W5 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRN3Q9H3W5 DUSP8P5-201ENST00000422884 1815 ntBASIC20.75■□□□□ 0.91
LRRN3Q9H3W5 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRN3Q9H3W5 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRN3Q9H3W5 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.75■□□□□ 0.91
LRRN3Q9H3W5 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
LRRN3Q9H3W5 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRN3Q9H3W5 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.74■□□□□ 0.91
LRRN3Q9H3W5 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRRN3Q9H3W5 AP004607.7-201ENST00000527152 1677 ntBASIC20.74■□□□□ 0.91
LRRN3Q9H3W5 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
LRRN3Q9H3W5 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRRN3Q9H3W5 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRN3Q9H3W5 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
LRRN3Q9H3W5 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRRN3Q9H3W5 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRN3Q9H3W5 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms