Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.8■□□□□ 0.76
POLR2J3Q9H1A7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2J3Q9H1A7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.8■□□□□ 0.76
POLR2J3Q9H1A7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.8■□□□□ 0.76
POLR2J3Q9H1A7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2J3Q9H1A7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2J3Q9H1A7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.8■□□□□ 0.76
POLR2J3Q9H1A7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2J3Q9H1A7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.79■□□□□ 0.76
POLR2J3Q9H1A7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
POLR2J3Q9H1A7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
POLR2J3Q9H1A7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
POLR2J3Q9H1A7 MIR3181-201ENST00000578512 73 ntBASIC19.79■□□□□ 0.76
POLR2J3Q9H1A7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.79■□□□□ 0.76
POLR2J3Q9H1A7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
POLR2J3Q9H1A7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
POLR2J3Q9H1A7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
POLR2J3Q9H1A7 OR7E47P-201ENST00000546390 1422 ntBASIC19.78■□□□□ 0.76
POLR2J3Q9H1A7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
POLR2J3Q9H1A7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.78■□□□□ 0.76
POLR2J3Q9H1A7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
POLR2J3Q9H1A7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
POLR2J3Q9H1A7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
POLR2J3Q9H1A7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
POLR2J3Q9H1A7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
POLR2J3Q9H1A7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
POLR2J3Q9H1A7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
POLR2J3Q9H1A7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
POLR2J3Q9H1A7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
POLR2J3Q9H1A7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
POLR2J3Q9H1A7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
POLR2J3Q9H1A7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
POLR2J3Q9H1A7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
POLR2J3Q9H1A7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.78■□□□□ 0.76
POLR2J3Q9H1A7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
POLR2J3Q9H1A7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
POLR2J3Q9H1A7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
POLR2J3Q9H1A7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
POLR2J3Q9H1A7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.77■□□□□ 0.76
POLR2J3Q9H1A7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.77■□□□□ 0.76
POLR2J3Q9H1A7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
POLR2J3Q9H1A7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
POLR2J3Q9H1A7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
POLR2J3Q9H1A7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
POLR2J3Q9H1A7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
POLR2J3Q9H1A7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.77■□□□□ 0.76
POLR2J3Q9H1A7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.77■□□□□ 0.76
POLR2J3Q9H1A7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.77■□□□□ 0.76
POLR2J3Q9H1A7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
POLR2J3Q9H1A7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
POLR2J3Q9H1A7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
POLR2J3Q9H1A7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
POLR2J3Q9H1A7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.77■□□□□ 0.76
POLR2J3Q9H1A7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
POLR2J3Q9H1A7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR2J3Q9H1A7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
POLR2J3Q9H1A7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
POLR2J3Q9H1A7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.76■□□□□ 0.75
POLR2J3Q9H1A7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR2J3Q9H1A7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
POLR2J3Q9H1A7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.76■□□□□ 0.75
POLR2J3Q9H1A7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
POLR2J3Q9H1A7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR2J3Q9H1A7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.76■□□□□ 0.75
POLR2J3Q9H1A7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.76■□□□□ 0.75
POLR2J3Q9H1A7 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.76■□□□□ 0.75
POLR2J3Q9H1A7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.76■□□□□ 0.75
POLR2J3Q9H1A7 AL138724.1-201ENST00000606771 1088 ntBASIC19.76■□□□□ 0.75
POLR2J3Q9H1A7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
POLR2J3Q9H1A7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR2J3Q9H1A7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.76■□□□□ 0.75
POLR2J3Q9H1A7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.76■□□□□ 0.75
POLR2J3Q9H1A7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR2J3Q9H1A7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
POLR2J3Q9H1A7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
POLR2J3Q9H1A7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
POLR2J3Q9H1A7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
POLR2J3Q9H1A7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
POLR2J3Q9H1A7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
POLR2J3Q9H1A7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
POLR2J3Q9H1A7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.75■□□□□ 0.75
POLR2J3Q9H1A7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
POLR2J3Q9H1A7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
POLR2J3Q9H1A7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
POLR2J3Q9H1A7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
POLR2J3Q9H1A7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
POLR2J3Q9H1A7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.75■□□□□ 0.75
POLR2J3Q9H1A7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
POLR2J3Q9H1A7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
POLR2J3Q9H1A7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
POLR2J3Q9H1A7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
POLR2J3Q9H1A7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
POLR2J3Q9H1A7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.74■□□□□ 0.75
POLR2J3Q9H1A7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
POLR2J3Q9H1A7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
POLR2J3Q9H1A7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
POLR2J3Q9H1A7 AC010141.3-201ENST00000456659 717 ntBASIC19.74■□□□□ 0.75
POLR2J3Q9H1A7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.74■□□□□ 0.75
POLR2J3Q9H1A7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
POLR2J3Q9H1A7 AL512631.2-201ENST00000604634 923 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms