Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDH15Q96QU1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH15Q96QU1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.11■□□□□ 0.97
PCDH15Q96QU1 PRORSD1P-201ENST00000295112 541 ntBASIC21.11■□□□□ 0.97
PCDH15Q96QU1 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH15Q96QU1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH15Q96QU1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDH15Q96QU1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.11■□□□□ 0.97
PCDH15Q96QU1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDH15Q96QU1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDH15Q96QU1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PCDH15Q96QU1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDH15Q96QU1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH15Q96QU1 AC092068.2-201ENST00000590491 1708 ntBASIC21.11■□□□□ 0.97
PCDH15Q96QU1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH15Q96QU1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH15Q96QU1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDH15Q96QU1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
PCDH15Q96QU1 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH15Q96QU1 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH15Q96QU1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH15Q96QU1 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.1■□□□□ 0.97
PCDH15Q96QU1 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH15Q96QU1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDH15Q96QU1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
PCDH15Q96QU1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.1■□□□□ 0.97
PCDH15Q96QU1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH15Q96QU1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PCDH15Q96QU1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH15Q96QU1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH15Q96QU1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH15Q96QU1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDH15Q96QU1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.1■□□□□ 0.97
PCDH15Q96QU1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDH15Q96QU1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDH15Q96QU1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PCDH15Q96QU1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.09■□□□□ 0.97
PCDH15Q96QU1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PCDH15Q96QU1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH15Q96QU1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH15Q96QU1 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDH15Q96QU1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PCDH15Q96QU1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.08■□□□□ 0.97
PCDH15Q96QU1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDH15Q96QU1 EEF1DP3-203ENST00000566025 782 ntBASIC21.08■□□□□ 0.97
PCDH15Q96QU1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.08■□□□□ 0.97
PCDH15Q96QU1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDH15Q96QU1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
PCDH15Q96QU1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PCDH15Q96QU1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDH15Q96QU1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDH15Q96QU1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDH15Q96QU1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PCDH15Q96QU1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PCDH15Q96QU1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.08■□□□□ 0.96
PCDH15Q96QU1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.08■□□□□ 0.96
PCDH15Q96QU1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.08■□□□□ 0.96
PCDH15Q96QU1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.08■□□□□ 0.96
PCDH15Q96QU1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.08■□□□□ 0.96
PCDH15Q96QU1 MIR4758-201ENST00000577688 71 ntBASIC21.08■□□□□ 0.96
PCDH15Q96QU1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDH15Q96QU1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.96
PCDH15Q96QU1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PCDH15Q96QU1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH15Q96QU1 RARRES2P4-201ENST00000514074 484 ntBASIC21.07■□□□□ 0.96
PCDH15Q96QU1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.07■□□□□ 0.96
PCDH15Q96QU1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PCDH15Q96QU1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDH15Q96QU1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH15Q96QU1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH15Q96QU1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
PCDH15Q96QU1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PCDH15Q96QU1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.06■□□□□ 0.96
PCDH15Q96QU1 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDH15Q96QU1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH15Q96QU1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.06■□□□□ 0.96
PCDH15Q96QU1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PCDH15Q96QU1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDH15Q96QU1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH15Q96QU1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.06■□□□□ 0.96
PCDH15Q96QU1 AC016405.3-201ENST00000607710 860 ntBASIC21.06■□□□□ 0.96
PCDH15Q96QU1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH15Q96QU1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH15Q96QU1 ANOS2P-203ENST00000472227 1816 ntBASIC21.06■□□□□ 0.96
PCDH15Q96QU1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH15Q96QU1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH15Q96QU1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH15Q96QU1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
PCDH15Q96QU1 MIPEPP3-201ENST00000412105 444 ntBASIC21.05■□□□□ 0.96
PCDH15Q96QU1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
PCDH15Q96QU1 MYC-209ENST00000641252 345 ntBASIC21.05■□□□□ 0.96
PCDH15Q96QU1 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH15Q96QU1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH15Q96QU1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH15Q96QU1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDH15Q96QU1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.05■□□□□ 0.96
PCDH15Q96QU1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.05■□□□□ 0.96
PCDH15Q96QU1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDH15Q96QU1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.05■□□□□ 0.96
PCDH15Q96QU1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms