Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC004812.2-201ENST00000611079 2094 ntBASIC18.43■□□□□ 0.54
CSMD1Q96PZ7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CSMD1Q96PZ7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CSMD1Q96PZ7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CSMD1Q96PZ7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CSMD1Q96PZ7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CSMD1Q96PZ7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CSMD1Q96PZ7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.43■□□□□ 0.54
CSMD1Q96PZ7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.43■□□□□ 0.54
CSMD1Q96PZ7 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.43■□□□□ 0.54
CSMD1Q96PZ7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.43■□□□□ 0.54
CSMD1Q96PZ7 AC010536.3-201ENST00000620306 533 ntBASIC18.43■□□□□ 0.54
CSMD1Q96PZ7 AC012306.2-201ENST00000609350 630 ntBASIC18.43■□□□□ 0.54
CSMD1Q96PZ7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CSMD1Q96PZ7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CSMD1Q96PZ7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSMD1Q96PZ7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSMD1Q96PZ7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSMD1Q96PZ7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSMD1Q96PZ7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSMD1Q96PZ7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.42■□□□□ 0.54
CSMD1Q96PZ7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.42■□□□□ 0.54
CSMD1Q96PZ7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.42■□□□□ 0.54
CSMD1Q96PZ7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.42■□□□□ 0.54
CSMD1Q96PZ7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CSMD1Q96PZ7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.42■□□□□ 0.54
CSMD1Q96PZ7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSMD1Q96PZ7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.42■□□□□ 0.54
CSMD1Q96PZ7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CSMD1Q96PZ7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CSMD1Q96PZ7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSMD1Q96PZ7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CSMD1Q96PZ7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSMD1Q96PZ7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.42■□□□□ 0.54
CSMD1Q96PZ7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CSMD1Q96PZ7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CSMD1Q96PZ7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CSMD1Q96PZ7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
CSMD1Q96PZ7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.41■□□□□ 0.54
CSMD1Q96PZ7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.41■□□□□ 0.54
CSMD1Q96PZ7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSMD1Q96PZ7 ABCB10P4-201ENST00000566803 2184 ntBASIC18.41■□□□□ 0.54
CSMD1Q96PZ7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CSMD1Q96PZ7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.41■□□□□ 0.54
CSMD1Q96PZ7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSMD1Q96PZ7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CSMD1Q96PZ7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSMD1Q96PZ7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSMD1Q96PZ7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.41■□□□□ 0.54
CSMD1Q96PZ7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSMD1Q96PZ7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.41■□□□□ 0.54
CSMD1Q96PZ7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CSMD1Q96PZ7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CSMD1Q96PZ7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSMD1Q96PZ7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CSMD1Q96PZ7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CSMD1Q96PZ7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSMD1Q96PZ7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSMD1Q96PZ7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.4■□□□□ 0.54
CSMD1Q96PZ7 AC013268.1-206ENST00000638368 961 ntBASIC18.4■□□□□ 0.54
CSMD1Q96PZ7 AC112229.1-201ENST00000639295 961 ntBASIC18.4■□□□□ 0.54
CSMD1Q96PZ7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSMD1Q96PZ7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSMD1Q96PZ7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSMD1Q96PZ7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CSMD1Q96PZ7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CSMD1Q96PZ7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CSMD1Q96PZ7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.4■□□□□ 0.54
CSMD1Q96PZ7 AC097493.4-201ENST00000641197 219 ntBASIC18.4■□□□□ 0.54
CSMD1Q96PZ7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CSMD1Q96PZ7 LINC01529-204ENST00000636474 1715 ntBASIC18.39■□□□□ 0.54
CSMD1Q96PZ7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.39■□□□□ 0.54
CSMD1Q96PZ7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.54
CSMD1Q96PZ7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.39■□□□□ 0.54
CSMD1Q96PZ7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CSMD1Q96PZ7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSMD1Q96PZ7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSMD1Q96PZ7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSMD1Q96PZ7 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CSMD1Q96PZ7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.39■□□□□ 0.53
CSMD1Q96PZ7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CSMD1Q96PZ7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSMD1Q96PZ7 C2orf69P4-201ENST00000565394 541 ntBASIC18.39■□□□□ 0.53
CSMD1Q96PZ7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CSMD1Q96PZ7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSMD1Q96PZ7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSMD1Q96PZ7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSMD1Q96PZ7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CSMD1Q96PZ7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSMD1Q96PZ7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSMD1Q96PZ7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CSMD1Q96PZ7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CSMD1Q96PZ7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSMD1Q96PZ7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CSMD1Q96PZ7 AP001160.3-201ENST00000601484 763 ntBASIC18.38■□□□□ 0.53
CSMD1Q96PZ7 REXO1L12P-201ENST00000622156 912 ntBASIC18.38■□□□□ 0.53
CSMD1Q96PZ7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSMD1Q96PZ7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSMD1Q96PZ7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.38■□□□□ 0.53
CSMD1Q96PZ7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms