Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MS4A4EQ96PG1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
MS4A4EQ96PG1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
MS4A4EQ96PG1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MS4A4EQ96PG1 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.05■□□□□ 0.8
MS4A4EQ96PG1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.05■□□□□ 0.8
MS4A4EQ96PG1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.05■□□□□ 0.8
MS4A4EQ96PG1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MS4A4EQ96PG1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MS4A4EQ96PG1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.05■□□□□ 0.8
MS4A4EQ96PG1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.05■□□□□ 0.8
MS4A4EQ96PG1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.05■□□□□ 0.8
MS4A4EQ96PG1 AL355001.2-201ENST00000620617 1191 ntBASIC20.05■□□□□ 0.8
MS4A4EQ96PG1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MS4A4EQ96PG1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
MS4A4EQ96PG1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
MS4A4EQ96PG1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MS4A4EQ96PG1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MS4A4EQ96PG1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MS4A4EQ96PG1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.04■□□□□ 0.8
MS4A4EQ96PG1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MS4A4EQ96PG1 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.04■□□□□ 0.8
MS4A4EQ96PG1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.04■□□□□ 0.8
MS4A4EQ96PG1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.04■□□□□ 0.8
MS4A4EQ96PG1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.04■□□□□ 0.8
MS4A4EQ96PG1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
MS4A4EQ96PG1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MS4A4EQ96PG1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MS4A4EQ96PG1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.04■□□□□ 0.8
MS4A4EQ96PG1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.04■□□□□ 0.8
MS4A4EQ96PG1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A4EQ96PG1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A4EQ96PG1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A4EQ96PG1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.03■□□□□ 0.8
MS4A4EQ96PG1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A4EQ96PG1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A4EQ96PG1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A4EQ96PG1 AP004607.7-201ENST00000527152 1677 ntBASIC20.03■□□□□ 0.8
MS4A4EQ96PG1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
MS4A4EQ96PG1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.03■□□□□ 0.8
MS4A4EQ96PG1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A4EQ96PG1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A4EQ96PG1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.02■□□□□ 0.8
MS4A4EQ96PG1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A4EQ96PG1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A4EQ96PG1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A4EQ96PG1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
MS4A4EQ96PG1 MIR939-201ENST00000401314 82 ntBASIC20.02■□□□□ 0.8
MS4A4EQ96PG1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A4EQ96PG1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.02■□□□□ 0.8
MS4A4EQ96PG1 AF213884.3-201ENST00000563833 479 ntBASIC20.02■□□□□ 0.8
MS4A4EQ96PG1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A4EQ96PG1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.02■□□□□ 0.8
MS4A4EQ96PG1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A4EQ96PG1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.02■□□□□ 0.8
MS4A4EQ96PG1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A4EQ96PG1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.79
MS4A4EQ96PG1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
MS4A4EQ96PG1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
MS4A4EQ96PG1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
MS4A4EQ96PG1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.01■□□□□ 0.79
MS4A4EQ96PG1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MS4A4EQ96PG1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MS4A4EQ96PG1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MS4A4EQ96PG1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MS4A4EQ96PG1 AC091305.1-201ENST00000479476 895 ntBASIC20.01■□□□□ 0.79
MS4A4EQ96PG1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MS4A4EQ96PG1 SMUG1P1-201ENST00000590640 811 ntBASIC20.01■□□□□ 0.79
MS4A4EQ96PG1 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.01■□□□□ 0.79
MS4A4EQ96PG1 AL139246.5-201ENST00000606645 996 ntBASIC20.01■□□□□ 0.79
MS4A4EQ96PG1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MS4A4EQ96PG1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MS4A4EQ96PG1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
MS4A4EQ96PG1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MS4A4EQ96PG1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MS4A4EQ96PG1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
MS4A4EQ96PG1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20■□□□□ 0.79
MS4A4EQ96PG1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
MS4A4EQ96PG1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20■□□□□ 0.79
MS4A4EQ96PG1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
MS4A4EQ96PG1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MS4A4EQ96PG1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20■□□□□ 0.79
MS4A4EQ96PG1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
MS4A4EQ96PG1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20■□□□□ 0.79
MS4A4EQ96PG1 RASA4CP-201ENST00000424092 1398 ntBASIC20■□□□□ 0.79
MS4A4EQ96PG1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MS4A4EQ96PG1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MS4A4EQ96PG1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20■□□□□ 0.79
MS4A4EQ96PG1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
MS4A4EQ96PG1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
MS4A4EQ96PG1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
MS4A4EQ96PG1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MS4A4EQ96PG1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20■□□□□ 0.79
MS4A4EQ96PG1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
MS4A4EQ96PG1 TSPY26P-201ENST00000476365 1326 ntBASIC20■□□□□ 0.79
MS4A4EQ96PG1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MS4A4EQ96PG1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20■□□□□ 0.79
MS4A4EQ96PG1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MS4A4EQ96PG1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MS4A4EQ96PG1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms