Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNTNAP3BQ96NU0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CNTNAP3BQ96NU0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNTNAP3BQ96NU0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNTNAP3BQ96NU0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNTNAP3BQ96NU0 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNTNAP3BQ96NU0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.6■□□□□ 0.89
CNTNAP3BQ96NU0 AC087499.1-201ENST00000418141 1075 ntBASIC20.6■□□□□ 0.89
CNTNAP3BQ96NU0 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.6■□□□□ 0.89
CNTNAP3BQ96NU0 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.6■□□□□ 0.89
CNTNAP3BQ96NU0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CNTNAP3BQ96NU0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CNTNAP3BQ96NU0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNTNAP3BQ96NU0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNTNAP3BQ96NU0 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNTNAP3BQ96NU0 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNTNAP3BQ96NU0 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CNTNAP3BQ96NU0 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.59■□□□□ 0.89
CNTNAP3BQ96NU0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CNTNAP3BQ96NU0 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.59■□□□□ 0.89
CNTNAP3BQ96NU0 RN7SL850P-201ENST00000579959 291 ntBASIC20.59■□□□□ 0.89
CNTNAP3BQ96NU0 CYP2T3P-201ENST00000601990 817 ntBASIC20.59■□□□□ 0.89
CNTNAP3BQ96NU0 AC013268.1-206ENST00000638368 961 ntBASIC20.59■□□□□ 0.89
CNTNAP3BQ96NU0 AC112229.1-201ENST00000639295 961 ntBASIC20.59■□□□□ 0.89
CNTNAP3BQ96NU0 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.59■□□□□ 0.89
CNTNAP3BQ96NU0 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNTNAP3BQ96NU0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNTNAP3BQ96NU0 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.59■□□□□ 0.89
CNTNAP3BQ96NU0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CNTNAP3BQ96NU0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNTNAP3BQ96NU0 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CNTNAP3BQ96NU0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.58■□□□□ 0.89
CNTNAP3BQ96NU0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CNTNAP3BQ96NU0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNTNAP3BQ96NU0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNTNAP3BQ96NU0 TPM4P1-201ENST00000436100 807 ntBASIC20.58■□□□□ 0.89
CNTNAP3BQ96NU0 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.58■□□□□ 0.89
CNTNAP3BQ96NU0 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CNTNAP3BQ96NU0 AC016405.3-201ENST00000607710 860 ntBASIC20.58■□□□□ 0.89
CNTNAP3BQ96NU0 AL590326.2-201ENST00000625139 305 ntBASIC20.58■□□□□ 0.89
CNTNAP3BQ96NU0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNTNAP3BQ96NU0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CNTNAP3BQ96NU0 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CNTNAP3BQ96NU0 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CNTNAP3BQ96NU0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CNTNAP3BQ96NU0 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNTNAP3BQ96NU0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNTNAP3BQ96NU0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNTNAP3BQ96NU0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CNTNAP3BQ96NU0 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CNTNAP3BQ96NU0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNTNAP3BQ96NU0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CNTNAP3BQ96NU0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNTNAP3BQ96NU0 POU5F1P4-201ENST00000413175 1085 ntBASIC20.57■□□□□ 0.88
CNTNAP3BQ96NU0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CNTNAP3BQ96NU0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.57■□□□□ 0.88
CNTNAP3BQ96NU0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.57■□□□□ 0.88
CNTNAP3BQ96NU0 AC008694.1-202ENST00000636953 945 ntBASIC20.57■□□□□ 0.88
CNTNAP3BQ96NU0 AC097493.4-201ENST00000641197 219 ntBASIC20.57■□□□□ 0.88
CNTNAP3BQ96NU0 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CNTNAP3BQ96NU0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.56■□□□□ 0.88
CNTNAP3BQ96NU0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNTNAP3BQ96NU0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.56■□□□□ 0.88
CNTNAP3BQ96NU0 AL512625.2-201ENST00000417533 625 ntBASIC20.56■□□□□ 0.88
CNTNAP3BQ96NU0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.56■□□□□ 0.88
CNTNAP3BQ96NU0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
CNTNAP3BQ96NU0 AL049597.2-201ENST00000565575 961 ntBASIC20.56■□□□□ 0.88
CNTNAP3BQ96NU0 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.56■□□□□ 0.88
CNTNAP3BQ96NU0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.56■□□□□ 0.88
CNTNAP3BQ96NU0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CNTNAP3BQ96NU0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
CNTNAP3BQ96NU0 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNTNAP3BQ96NU0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CNTNAP3BQ96NU0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CNTNAP3BQ96NU0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CNTNAP3BQ96NU0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CNTNAP3BQ96NU0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.55■□□□□ 0.88
CNTNAP3BQ96NU0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNTNAP3BQ96NU0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.55■□□□□ 0.88
CNTNAP3BQ96NU0 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNTNAP3BQ96NU0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CNTNAP3BQ96NU0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNTNAP3BQ96NU0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.55■□□□□ 0.88
CNTNAP3BQ96NU0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.55■□□□□ 0.88
CNTNAP3BQ96NU0 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.55■□□□□ 0.88
CNTNAP3BQ96NU0 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.55■□□□□ 0.88
CNTNAP3BQ96NU0 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CNTNAP3BQ96NU0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.55■□□□□ 0.88
CNTNAP3BQ96NU0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.55■□□□□ 0.88
CNTNAP3BQ96NU0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CNTNAP3BQ96NU0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP3BQ96NU0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP3BQ96NU0 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP3BQ96NU0 CD177P1-201ENST00000606252 935 ntBASIC20.54■□□□□ 0.88
CNTNAP3BQ96NU0 AC012306.2-201ENST00000609350 630 ntBASIC20.54■□□□□ 0.88
CNTNAP3BQ96NU0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP3BQ96NU0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP3BQ96NU0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP3BQ96NU0 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.54■□□□□ 0.88
CNTNAP3BQ96NU0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms