Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CALR3Q96L12 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CALR3Q96L12 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.68■■□□□ 1.22
CALR3Q96L12 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CALR3Q96L12 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CALR3Q96L12 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CALR3Q96L12 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CALR3Q96L12 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.68■■□□□ 1.22
CALR3Q96L12 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CALR3Q96L12 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
CALR3Q96L12 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
CALR3Q96L12 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC22.68■■□□□ 1.22
CALR3Q96L12 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
CALR3Q96L12 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.67■■□□□ 1.22
CALR3Q96L12 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CALR3Q96L12 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
CALR3Q96L12 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CALR3Q96L12 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
CALR3Q96L12 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CALR3Q96L12 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CALR3Q96L12 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CALR3Q96L12 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.66■■□□□ 1.22
CALR3Q96L12 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CALR3Q96L12 SRD5A1P1-201ENST00000442297 786 ntBASIC22.66■■□□□ 1.22
CALR3Q96L12 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.66■■□□□ 1.22
CALR3Q96L12 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CALR3Q96L12 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CALR3Q96L12 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.66■■□□□ 1.22
CALR3Q96L12 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CALR3Q96L12 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CALR3Q96L12 OXCT2P1-201ENST00000447263 1535 ntBASIC22.66■■□□□ 1.22
CALR3Q96L12 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.66■■□□□ 1.22
CALR3Q96L12 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.66■■□□□ 1.22
CALR3Q96L12 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CALR3Q96L12 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.65■■□□□ 1.22
CALR3Q96L12 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.65■■□□□ 1.22
CALR3Q96L12 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.65■■□□□ 1.22
CALR3Q96L12 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.65■■□□□ 1.22
CALR3Q96L12 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CALR3Q96L12 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CALR3Q96L12 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.65■■□□□ 1.22
CALR3Q96L12 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.65■■□□□ 1.22
CALR3Q96L12 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.65■■□□□ 1.22
CALR3Q96L12 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.65■■□□□ 1.22
CALR3Q96L12 AL138724.1-201ENST00000606771 1088 ntBASIC22.65■■□□□ 1.22
CALR3Q96L12 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CALR3Q96L12 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CALR3Q96L12 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CALR3Q96L12 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CALR3Q96L12 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CALR3Q96L12 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CALR3Q96L12 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CALR3Q96L12 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.64■■□□□ 1.21
CALR3Q96L12 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.64■■□□□ 1.21
CALR3Q96L12 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.64■■□□□ 1.21
CALR3Q96L12 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CALR3Q96L12 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.64■■□□□ 1.21
CALR3Q96L12 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.64■■□□□ 1.21
CALR3Q96L12 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CALR3Q96L12 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
CALR3Q96L12 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.63■■□□□ 1.21
CALR3Q96L12 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CALR3Q96L12 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
CALR3Q96L12 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
CALR3Q96L12 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.63■■□□□ 1.21
CALR3Q96L12 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CALR3Q96L12 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CALR3Q96L12 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CALR3Q96L12 FEM1AP4-201ENST00000443167 1987 ntBASIC22.63■■□□□ 1.21
CALR3Q96L12 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CALR3Q96L12 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CALR3Q96L12 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.63■■□□□ 1.21
CALR3Q96L12 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CALR3Q96L12 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CALR3Q96L12 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
CALR3Q96L12 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CALR3Q96L12 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.62■■□□□ 1.21
CALR3Q96L12 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.62■■□□□ 1.21
CALR3Q96L12 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.62■■□□□ 1.21
CALR3Q96L12 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
CALR3Q96L12 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CALR3Q96L12 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CALR3Q96L12 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CALR3Q96L12 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CALR3Q96L12 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.61■■□□□ 1.21
CALR3Q96L12 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC22.61■■□□□ 1.21
CALR3Q96L12 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CALR3Q96L12 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.61■■□□□ 1.21
CALR3Q96L12 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CALR3Q96L12 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.61■■□□□ 1.21
CALR3Q96L12 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC22.61■■□□□ 1.21
CALR3Q96L12 DUX4L19-201ENST00000557448 1267 ntBASIC22.61■■□□□ 1.21
CALR3Q96L12 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CALR3Q96L12 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CALR3Q96L12 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
CALR3Q96L12 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CALR3Q96L12 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC22.61■■□□□ 1.21
CALR3Q96L12 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CALR3Q96L12 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
CALR3Q96L12 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms