Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLPTM1LQ96KA5 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.59■□□□□ 0.89
CLPTM1LQ96KA5 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLPTM1LQ96KA5 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.59■□□□□ 0.89
CLPTM1LQ96KA5 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.59■□□□□ 0.89
CLPTM1LQ96KA5 AC129492.7-201ENST00000622992 756 ntBASIC20.59■□□□□ 0.89
CLPTM1LQ96KA5 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLPTM1LQ96KA5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CLPTM1LQ96KA5 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLPTM1LQ96KA5 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLPTM1LQ96KA5 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLPTM1LQ96KA5 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.59■□□□□ 0.89
CLPTM1LQ96KA5 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.58■□□□□ 0.89
CLPTM1LQ96KA5 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLPTM1LQ96KA5 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.58■□□□□ 0.89
CLPTM1LQ96KA5 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.58■□□□□ 0.89
CLPTM1LQ96KA5 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.58■□□□□ 0.89
CLPTM1LQ96KA5 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLPTM1LQ96KA5 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLPTM1LQ96KA5 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.58■□□□□ 0.89
CLPTM1LQ96KA5 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.58■□□□□ 0.89
CLPTM1LQ96KA5 THA1P-201ENST00000590384 1145 ntBASIC20.58■□□□□ 0.89
CLPTM1LQ96KA5 AC019171.1-201ENST00000601251 1056 ntBASIC20.58■□□□□ 0.89
CLPTM1LQ96KA5 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CLPTM1LQ96KA5 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CLPTM1LQ96KA5 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.58■□□□□ 0.88
CLPTM1LQ96KA5 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.58■□□□□ 0.88
CLPTM1LQ96KA5 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLPTM1LQ96KA5 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLPTM1LQ96KA5 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLPTM1LQ96KA5 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CLPTM1LQ96KA5 RNF126P1-201ENST00000567452 1320 ntBASIC20.57■□□□□ 0.88
CLPTM1LQ96KA5 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CLPTM1LQ96KA5 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CLPTM1LQ96KA5 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CLPTM1LQ96KA5 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.57■□□□□ 0.88
CLPTM1LQ96KA5 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.57■□□□□ 0.88
CLPTM1LQ96KA5 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLPTM1LQ96KA5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLPTM1LQ96KA5 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLPTM1LQ96KA5 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.57■□□□□ 0.88
CLPTM1LQ96KA5 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLPTM1LQ96KA5 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLPTM1LQ96KA5 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLPTM1LQ96KA5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLPTM1LQ96KA5 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.56■□□□□ 0.88
CLPTM1LQ96KA5 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
CLPTM1LQ96KA5 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLPTM1LQ96KA5 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLPTM1LQ96KA5 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CLPTM1LQ96KA5 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLPTM1LQ96KA5 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.56■□□□□ 0.88
CLPTM1LQ96KA5 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLPTM1LQ96KA5 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CLPTM1LQ96KA5 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLPTM1LQ96KA5 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
CLPTM1LQ96KA5 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLPTM1LQ96KA5 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLPTM1LQ96KA5 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CLPTM1LQ96KA5 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CLPTM1LQ96KA5 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CLPTM1LQ96KA5 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLPTM1LQ96KA5 AFG3L1P-217ENST00000557444 2447 ntBASIC20.55■□□□□ 0.88
CLPTM1LQ96KA5 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLPTM1LQ96KA5 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CLPTM1LQ96KA5 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLPTM1LQ96KA5 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.55■□□□□ 0.88
CLPTM1LQ96KA5 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLPTM1LQ96KA5 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.55■□□□□ 0.88
CLPTM1LQ96KA5 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLPTM1LQ96KA5 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.55■□□□□ 0.88
CLPTM1LQ96KA5 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.55■□□□□ 0.88
CLPTM1LQ96KA5 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLPTM1LQ96KA5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLPTM1LQ96KA5 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLPTM1LQ96KA5 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CLPTM1LQ96KA5 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLPTM1LQ96KA5 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLPTM1LQ96KA5 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.55■□□□□ 0.88
CLPTM1LQ96KA5 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLPTM1LQ96KA5 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLPTM1LQ96KA5 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLPTM1LQ96KA5 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CLPTM1LQ96KA5 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLPTM1LQ96KA5 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLPTM1LQ96KA5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLPTM1LQ96KA5 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLPTM1LQ96KA5 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
CLPTM1LQ96KA5 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CLPTM1LQ96KA5 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.54■□□□□ 0.88
CLPTM1LQ96KA5 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.54■□□□□ 0.88
CLPTM1LQ96KA5 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLPTM1LQ96KA5 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CLPTM1LQ96KA5 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.54■□□□□ 0.88
CLPTM1LQ96KA5 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
CLPTM1LQ96KA5 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLPTM1LQ96KA5 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLPTM1LQ96KA5 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLPTM1LQ96KA5 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLPTM1LQ96KA5 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms