Protein–RNA interactions for Protein: Q96CG3

TIFA, TRAF-interacting protein with FHA domain-containing protein A, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIFAQ96CG3 AC073648.6-201ENST00000641589 218 ntBASIC23.17■■□□□ 1.3
TIFAQ96CG3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TIFAQ96CG3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.17■■□□□ 1.3
TIFAQ96CG3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
TIFAQ96CG3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.17■■□□□ 1.3
TIFAQ96CG3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TIFAQ96CG3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TIFAQ96CG3 AC055733.4-201ENST00000638462 1354 ntBASIC23.16■■□□□ 1.3
TIFAQ96CG3 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.16■■□□□ 1.3
TIFAQ96CG3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TIFAQ96CG3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC23.16■■□□□ 1.3
TIFAQ96CG3 UBE2SP1-201ENST00000450587 669 ntBASIC23.16■■□□□ 1.3
TIFAQ96CG3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC23.16■■□□□ 1.3
TIFAQ96CG3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.16■■□□□ 1.3
TIFAQ96CG3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.16■■□□□ 1.3
TIFAQ96CG3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TIFAQ96CG3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TIFAQ96CG3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TIFAQ96CG3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC23.15■■□□□ 1.3
TIFAQ96CG3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
TIFAQ96CG3 AC026366.1-201ENST00000488803 879 ntBASIC23.15■■□□□ 1.3
TIFAQ96CG3 AC091874.3-201ENST00000512672 1195 ntBASIC23.15■■□□□ 1.3
TIFAQ96CG3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC23.15■■□□□ 1.3
TIFAQ96CG3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.15■■□□□ 1.3
TIFAQ96CG3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.15■■□□□ 1.3
TIFAQ96CG3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
TIFAQ96CG3 AC073912.3-201ENST00000624414 853 ntBASIC23.15■■□□□ 1.3
TIFAQ96CG3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TIFAQ96CG3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TIFAQ96CG3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TIFAQ96CG3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TIFAQ96CG3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TIFAQ96CG3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
TIFAQ96CG3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.14■■□□□ 1.3
TIFAQ96CG3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.14■■□□□ 1.3
TIFAQ96CG3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TIFAQ96CG3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TIFAQ96CG3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TIFAQ96CG3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
TIFAQ96CG3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.14■■□□□ 1.29
TIFAQ96CG3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TIFAQ96CG3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC23.14■■□□□ 1.29
TIFAQ96CG3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC23.14■■□□□ 1.29
TIFAQ96CG3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.14■■□□□ 1.29
TIFAQ96CG3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC23.14■■□□□ 1.29
TIFAQ96CG3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TIFAQ96CG3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TIFAQ96CG3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TIFAQ96CG3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TIFAQ96CG3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.13■■□□□ 1.29
TIFAQ96CG3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TIFAQ96CG3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.13■■□□□ 1.29
TIFAQ96CG3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TIFAQ96CG3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
TIFAQ96CG3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC23.13■■□□□ 1.29
TIFAQ96CG3 AC010331.1-201ENST00000611423 582 ntBASIC23.13■■□□□ 1.29
TIFAQ96CG3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.13■■□□□ 1.29
TIFAQ96CG3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TIFAQ96CG3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
TIFAQ96CG3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.13■■□□□ 1.29
TIFAQ96CG3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TIFAQ96CG3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
TIFAQ96CG3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
TIFAQ96CG3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TIFAQ96CG3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TIFAQ96CG3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
TIFAQ96CG3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TIFAQ96CG3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.12■■□□□ 1.29
TIFAQ96CG3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC23.12■■□□□ 1.29
TIFAQ96CG3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC23.12■■□□□ 1.29
TIFAQ96CG3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.12■■□□□ 1.29
TIFAQ96CG3 AC079630.1-202ENST00000618127 1840 ntBASIC23.12■■□□□ 1.29
TIFAQ96CG3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.11■■□□□ 1.29
TIFAQ96CG3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TIFAQ96CG3 MIR718-201ENST00000390190 70 ntBASIC23.11■■□□□ 1.29
TIFAQ96CG3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC23.11■■□□□ 1.29
TIFAQ96CG3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TIFAQ96CG3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TIFAQ96CG3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
TIFAQ96CG3 UNC93B5-201ENST00000530315 699 ntBASIC23.11■■□□□ 1.29
TIFAQ96CG3 AP003097.1-201ENST00000530657 1135 ntBASIC23.11■■□□□ 1.29
TIFAQ96CG3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TIFAQ96CG3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TIFAQ96CG3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
TIFAQ96CG3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TIFAQ96CG3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TIFAQ96CG3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.11■■□□□ 1.29
TIFAQ96CG3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
TIFAQ96CG3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.1■■□□□ 1.29
TIFAQ96CG3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
TIFAQ96CG3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TIFAQ96CG3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
TIFAQ96CG3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC23.1■■□□□ 1.29
TIFAQ96CG3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.1■■□□□ 1.29
TIFAQ96CG3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC23.1■■□□□ 1.29
TIFAQ96CG3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC23.1■■□□□ 1.29
TIFAQ96CG3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TIFAQ96CG3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TIFAQ96CG3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TIFAQ96CG3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms