Protein–RNA interactions for Protein: Q96AK3

APOBEC3D, DNA dC->dU-editing enzyme APOBEC-3D, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3DQ96AK3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOBEC3DQ96AK3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
APOBEC3DQ96AK3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.6■□□□□ 0.57
APOBEC3DQ96AK3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOBEC3DQ96AK3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
APOBEC3DQ96AK3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.6■□□□□ 0.57
APOBEC3DQ96AK3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.6■□□□□ 0.57
APOBEC3DQ96AK3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.6■□□□□ 0.57
APOBEC3DQ96AK3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOBEC3DQ96AK3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
APOBEC3DQ96AK3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOBEC3DQ96AK3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
APOBEC3DQ96AK3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOBEC3DQ96AK3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOBEC3DQ96AK3 LINC00565-201ENST00000562710 2331 ntBASIC18.6■□□□□ 0.57
APOBEC3DQ96AK3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOBEC3DQ96AK3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOBEC3DQ96AK3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOBEC3DQ96AK3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOBEC3DQ96AK3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
APOBEC3DQ96AK3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.59■□□□□ 0.57
APOBEC3DQ96AK3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOBEC3DQ96AK3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOBEC3DQ96AK3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.59■□□□□ 0.57
APOBEC3DQ96AK3 MIR572-201ENST00000384983 95 ntBASIC18.59■□□□□ 0.57
APOBEC3DQ96AK3 MIR638-201ENST00000385237 100 ntBASIC18.59■□□□□ 0.57
APOBEC3DQ96AK3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
APOBEC3DQ96AK3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
APOBEC3DQ96AK3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.59■□□□□ 0.57
APOBEC3DQ96AK3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
APOBEC3DQ96AK3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
APOBEC3DQ96AK3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOBEC3DQ96AK3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOBEC3DQ96AK3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.59■□□□□ 0.57
APOBEC3DQ96AK3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.58■□□□□ 0.57
APOBEC3DQ96AK3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.58■□□□□ 0.57
APOBEC3DQ96AK3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.58■□□□□ 0.57
APOBEC3DQ96AK3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
APOBEC3DQ96AK3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
APOBEC3DQ96AK3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
APOBEC3DQ96AK3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
APOBEC3DQ96AK3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.58■□□□□ 0.57
APOBEC3DQ96AK3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
APOBEC3DQ96AK3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.58■□□□□ 0.57
APOBEC3DQ96AK3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.57
APOBEC3DQ96AK3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
APOBEC3DQ96AK3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.58■□□□□ 0.56
APOBEC3DQ96AK3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.58■□□□□ 0.56
APOBEC3DQ96AK3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.58■□□□□ 0.56
APOBEC3DQ96AK3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.58■□□□□ 0.56
APOBEC3DQ96AK3 AC105233.4-201ENST00000642045 216 ntBASIC18.58■□□□□ 0.56
APOBEC3DQ96AK3 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.58■□□□□ 0.56
APOBEC3DQ96AK3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
APOBEC3DQ96AK3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
APOBEC3DQ96AK3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
APOBEC3DQ96AK3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
APOBEC3DQ96AK3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
APOBEC3DQ96AK3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
APOBEC3DQ96AK3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
APOBEC3DQ96AK3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOBEC3DQ96AK3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
APOBEC3DQ96AK3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOBEC3DQ96AK3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOBEC3DQ96AK3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.57■□□□□ 0.56
APOBEC3DQ96AK3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.57■□□□□ 0.56
APOBEC3DQ96AK3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
APOBEC3DQ96AK3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
APOBEC3DQ96AK3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOBEC3DQ96AK3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOBEC3DQ96AK3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOBEC3DQ96AK3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
APOBEC3DQ96AK3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.56■□□□□ 0.56
APOBEC3DQ96AK3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
APOBEC3DQ96AK3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
APOBEC3DQ96AK3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
APOBEC3DQ96AK3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
APOBEC3DQ96AK3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
APOBEC3DQ96AK3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.56■□□□□ 0.56
APOBEC3DQ96AK3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.56■□□□□ 0.56
APOBEC3DQ96AK3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
APOBEC3DQ96AK3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
APOBEC3DQ96AK3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
APOBEC3DQ96AK3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
APOBEC3DQ96AK3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
APOBEC3DQ96AK3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
APOBEC3DQ96AK3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.55■□□□□ 0.56
APOBEC3DQ96AK3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
APOBEC3DQ96AK3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOBEC3DQ96AK3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOBEC3DQ96AK3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
APOBEC3DQ96AK3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
APOBEC3DQ96AK3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOBEC3DQ96AK3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOBEC3DQ96AK3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.55■□□□□ 0.56
APOBEC3DQ96AK3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOBEC3DQ96AK3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.55■□□□□ 0.56
APOBEC3DQ96AK3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.55■□□□□ 0.56
APOBEC3DQ96AK3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOBEC3DQ96AK3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.55■□□□□ 0.56
APOBEC3DQ96AK3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms