Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNOT9Q92600 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.77■□□□□ 0.76
CNOT9Q92600 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
CNOT9Q92600 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNOT9Q92600 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNOT9Q92600 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.77■□□□□ 0.76
CNOT9Q92600 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.77■□□□□ 0.76
CNOT9Q92600 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.77■□□□□ 0.76
CNOT9Q92600 AC233992.3-201ENST00000607491 485 ntBASIC19.77■□□□□ 0.76
CNOT9Q92600 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
CNOT9Q92600 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CNOT9Q92600 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT9Q92600 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT9Q92600 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT9Q92600 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT9Q92600 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.76■□□□□ 0.75
CNOT9Q92600 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.76■□□□□ 0.75
CNOT9Q92600 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT9Q92600 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT9Q92600 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CNOT9Q92600 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT9Q92600 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT9Q92600 AC110285.6-201ENST00000617652 491 ntBASIC19.76■□□□□ 0.75
CNOT9Q92600 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT9Q92600 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CNOT9Q92600 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.76■□□□□ 0.75
CNOT9Q92600 AC026471.6-201ENST00000622954 1905 ntBASIC19.76■□□□□ 0.75
CNOT9Q92600 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT9Q92600 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT9Q92600 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT9Q92600 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT9Q92600 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT9Q92600 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.75■□□□□ 0.75
CNOT9Q92600 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNOT9Q92600 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNOT9Q92600 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.75■□□□□ 0.75
CNOT9Q92600 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.75■□□□□ 0.75
CNOT9Q92600 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.75■□□□□ 0.75
CNOT9Q92600 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNOT9Q92600 AC007375.3-201ENST00000600936 2314 ntBASIC19.75■□□□□ 0.75
CNOT9Q92600 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.75■□□□□ 0.75
CNOT9Q92600 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CNOT9Q92600 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.75■□□□□ 0.75
CNOT9Q92600 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNOT9Q92600 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.74■□□□□ 0.75
CNOT9Q92600 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.74■□□□□ 0.75
CNOT9Q92600 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CNOT9Q92600 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.74■□□□□ 0.75
CNOT9Q92600 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CNOT9Q92600 AC008764.7-201ENST00000593779 1081 ntBASIC19.74■□□□□ 0.75
CNOT9Q92600 AC106739.1-201ENST00000617035 715 ntBASIC19.74■□□□□ 0.75
CNOT9Q92600 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.74■□□□□ 0.75
CNOT9Q92600 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNOT9Q92600 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNOT9Q92600 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CNOT9Q92600 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNOT9Q92600 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.74■□□□□ 0.75
CNOT9Q92600 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT9Q92600 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT9Q92600 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT9Q92600 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.73■□□□□ 0.75
CNOT9Q92600 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.73■□□□□ 0.75
CNOT9Q92600 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT9Q92600 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT9Q92600 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.73■□□□□ 0.75
CNOT9Q92600 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.73■□□□□ 0.75
CNOT9Q92600 AC126544.1-201ENST00000580842 1059 ntBASIC19.73■□□□□ 0.75
CNOT9Q92600 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT9Q92600 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT9Q92600 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.73■□□□□ 0.75
CNOT9Q92600 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT9Q92600 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT9Q92600 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
CNOT9Q92600 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNOT9Q92600 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.72■□□□□ 0.75
CNOT9Q92600 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CNOT9Q92600 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNOT9Q92600 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
CNOT9Q92600 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.72■□□□□ 0.75
CNOT9Q92600 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.72■□□□□ 0.75
CNOT9Q92600 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CNOT9Q92600 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.72■□□□□ 0.75
CNOT9Q92600 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CNOT9Q92600 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
CNOT9Q92600 AC133561.4-201ENST00000566112 224 ntBASIC19.72■□□□□ 0.75
CNOT9Q92600 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.72■□□□□ 0.75
CNOT9Q92600 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.72■□□□□ 0.75
CNOT9Q92600 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CNOT9Q92600 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.72■□□□□ 0.75
CNOT9Q92600 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNOT9Q92600 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNOT9Q92600 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CNOT9Q92600 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.71■□□□□ 0.75
CNOT9Q92600 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.71■□□□□ 0.75
CNOT9Q92600 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNOT9Q92600 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNOT9Q92600 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CNOT9Q92600 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.71■□□□□ 0.75
CNOT9Q92600 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.71■□□□□ 0.75
CNOT9Q92600 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms