Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.42■□□□□ 0.7
PHF3Q92576 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.42■□□□□ 0.7
PHF3Q92576 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.42■□□□□ 0.7
PHF3Q92576 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHF3Q92576 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PHF3Q92576 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.42■□□□□ 0.7
PHF3Q92576 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.42■□□□□ 0.7
PHF3Q92576 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PHF3Q92576 AC026185.1-201ENST00000445748 174 ntBASIC19.42■□□□□ 0.7
PHF3Q92576 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.42■□□□□ 0.7
PHF3Q92576 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
PHF3Q92576 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.42■□□□□ 0.7
PHF3Q92576 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHF3Q92576 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHF3Q92576 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PHF3Q92576 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHF3Q92576 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.41■□□□□ 0.7
PHF3Q92576 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PHF3Q92576 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHF3Q92576 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
PHF3Q92576 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.41■□□□□ 0.7
PHF3Q92576 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.41■□□□□ 0.7
PHF3Q92576 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHF3Q92576 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.41■□□□□ 0.7
PHF3Q92576 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.41■□□□□ 0.7
PHF3Q92576 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.41■□□□□ 0.7
PHF3Q92576 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PHF3Q92576 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHF3Q92576 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.4■□□□□ 0.7
PHF3Q92576 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.4■□□□□ 0.7
PHF3Q92576 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PHF3Q92576 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.4■□□□□ 0.7
PHF3Q92576 AC010141.3-201ENST00000456659 717 ntBASIC19.4■□□□□ 0.7
PHF3Q92576 AC073111.5-205ENST00000641717 521 ntBASIC19.4■□□□□ 0.7
PHF3Q92576 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
PHF3Q92576 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHF3Q92576 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHF3Q92576 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PHF3Q92576 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PHF3Q92576 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.4■□□□□ 0.7
PHF3Q92576 LINC02228-203ENST00000641970 1355 ntBASIC19.4■□□□□ 0.7
PHF3Q92576 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PHF3Q92576 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PHF3Q92576 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.39■□□□□ 0.7
PHF3Q92576 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PHF3Q92576 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHF3Q92576 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHF3Q92576 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PHF3Q92576 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.39■□□□□ 0.69
PHF3Q92576 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.39■□□□□ 0.69
PHF3Q92576 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.39■□□□□ 0.69
PHF3Q92576 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHF3Q92576 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHF3Q92576 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.39■□□□□ 0.69
PHF3Q92576 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PHF3Q92576 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHF3Q92576 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PHF3Q92576 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.39■□□□□ 0.69
PHF3Q92576 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.39■□□□□ 0.69
PHF3Q92576 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHF3Q92576 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.39■□□□□ 0.69
PHF3Q92576 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.39■□□□□ 0.69
PHF3Q92576 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.39■□□□□ 0.69
PHF3Q92576 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHF3Q92576 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHF3Q92576 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHF3Q92576 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHF3Q92576 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PHF3Q92576 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.38■□□□□ 0.69
PHF3Q92576 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PHF3Q92576 LINC00565-201ENST00000562710 2331 ntBASIC19.38■□□□□ 0.69
PHF3Q92576 CDCA4P2-201ENST00000441182 718 ntBASIC19.38■□□□□ 0.69
PHF3Q92576 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PHF3Q92576 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PHF3Q92576 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PHF3Q92576 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PHF3Q92576 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PHF3Q92576 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PHF3Q92576 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.37■□□□□ 0.69
PHF3Q92576 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.37■□□□□ 0.69
PHF3Q92576 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.37■□□□□ 0.69
PHF3Q92576 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PHF3Q92576 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
PHF3Q92576 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PHF3Q92576 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PHF3Q92576 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PHF3Q92576 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PHF3Q92576 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PHF3Q92576 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PHF3Q92576 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PHF3Q92576 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.37■□□□□ 0.69
PHF3Q92576 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PHF3Q92576 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PHF3Q92576 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PHF3Q92576 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PHF3Q92576 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.36■□□□□ 0.69
PHF3Q92576 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.36■□□□□ 0.69
PHF3Q92576 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PHF3Q92576 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PHF3Q92576 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms