Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTN4IP1Q8WWV3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18■□□□□ 0.47
RTN4IP1Q8WWV3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RTN4IP1Q8WWV3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTN4IP1Q8WWV3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18■□□□□ 0.47
RTN4IP1Q8WWV3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18■□□□□ 0.47
RTN4IP1Q8WWV3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18■□□□□ 0.47
RTN4IP1Q8WWV3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18■□□□□ 0.47
RTN4IP1Q8WWV3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18■□□□□ 0.47
RTN4IP1Q8WWV3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18■□□□□ 0.47
RTN4IP1Q8WWV3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RTN4IP1Q8WWV3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18■□□□□ 0.47
RTN4IP1Q8WWV3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18■□□□□ 0.47
RTN4IP1Q8WWV3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTN4IP1Q8WWV3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
RTN4IP1Q8WWV3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
RTN4IP1Q8WWV3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18■□□□□ 0.47
RTN4IP1Q8WWV3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTN4IP1Q8WWV3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.99■□□□□ 0.47
RTN4IP1Q8WWV3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.99■□□□□ 0.47
RTN4IP1Q8WWV3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.99■□□□□ 0.47
RTN4IP1Q8WWV3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.99■□□□□ 0.47
RTN4IP1Q8WWV3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTN4IP1Q8WWV3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTN4IP1Q8WWV3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.99■□□□□ 0.47
RTN4IP1Q8WWV3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTN4IP1Q8WWV3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.99■□□□□ 0.47
RTN4IP1Q8WWV3 SRD5A1P1-201ENST00000442297 786 ntBASIC17.99■□□□□ 0.47
RTN4IP1Q8WWV3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTN4IP1Q8WWV3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.99■□□□□ 0.47
RTN4IP1Q8WWV3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTN4IP1Q8WWV3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTN4IP1Q8WWV3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.98■□□□□ 0.47
RTN4IP1Q8WWV3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN4IP1Q8WWV3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.98■□□□□ 0.47
RTN4IP1Q8WWV3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RTN4IP1Q8WWV3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN4IP1Q8WWV3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.98■□□□□ 0.47
RTN4IP1Q8WWV3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RTN4IP1Q8WWV3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN4IP1Q8WWV3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RTN4IP1Q8WWV3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTN4IP1Q8WWV3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTN4IP1Q8WWV3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN4IP1Q8WWV3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.98■□□□□ 0.47
RTN4IP1Q8WWV3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.98■□□□□ 0.47
RTN4IP1Q8WWV3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.98■□□□□ 0.47
RTN4IP1Q8WWV3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RTN4IP1Q8WWV3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RTN4IP1Q8WWV3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RTN4IP1Q8WWV3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN4IP1Q8WWV3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTN4IP1Q8WWV3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN4IP1Q8WWV3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.98■□□□□ 0.47
RTN4IP1Q8WWV3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTN4IP1Q8WWV3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.98■□□□□ 0.47
RTN4IP1Q8WWV3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN4IP1Q8WWV3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4IP1Q8WWV3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4IP1Q8WWV3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4IP1Q8WWV3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4IP1Q8WWV3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RTN4IP1Q8WWV3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4IP1Q8WWV3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4IP1Q8WWV3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4IP1Q8WWV3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.97■□□□□ 0.47
RTN4IP1Q8WWV3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RTN4IP1Q8WWV3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.97■□□□□ 0.47
RTN4IP1Q8WWV3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.97■□□□□ 0.47
RTN4IP1Q8WWV3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4IP1Q8WWV3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.97■□□□□ 0.47
RTN4IP1Q8WWV3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4IP1Q8WWV3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4IP1Q8WWV3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RTN4IP1Q8WWV3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.97■□□□□ 0.47
RTN4IP1Q8WWV3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4IP1Q8WWV3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.97■□□□□ 0.47
RTN4IP1Q8WWV3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4IP1Q8WWV3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4IP1Q8WWV3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
RTN4IP1Q8WWV3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4IP1Q8WWV3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4IP1Q8WWV3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4IP1Q8WWV3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4IP1Q8WWV3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4IP1Q8WWV3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4IP1Q8WWV3 AC099791.2-201ENST00000605725 427 ntBASIC17.96■□□□□ 0.47
RTN4IP1Q8WWV3 CA15P2-201ENST00000611168 834 ntBASIC17.96■□□□□ 0.47
RTN4IP1Q8WWV3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4IP1Q8WWV3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4IP1Q8WWV3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.96■□□□□ 0.47
RTN4IP1Q8WWV3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4IP1Q8WWV3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4IP1Q8WWV3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4IP1Q8WWV3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4IP1Q8WWV3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RTN4IP1Q8WWV3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
RTN4IP1Q8WWV3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RTN4IP1Q8WWV3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4IP1Q8WWV3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms