Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
SH3RF2Q8TEC5 AP004607.7-201ENST00000527152 1677 ntBASIC22.33■■□□□ 1.16
SH3RF2Q8TEC5 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
SH3RF2Q8TEC5 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.16
SH3RF2Q8TEC5 OR7E47P-201ENST00000546390 1422 ntBASIC22.32■■□□□ 1.16
SH3RF2Q8TEC5 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SH3RF2Q8TEC5 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SH3RF2Q8TEC5 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.32■■□□□ 1.16
SH3RF2Q8TEC5 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SH3RF2Q8TEC5 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SH3RF2Q8TEC5 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SH3RF2Q8TEC5 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SH3RF2Q8TEC5 KRT18P11-201ENST00000435214 1283 ntBASIC22.32■■□□□ 1.16
SH3RF2Q8TEC5 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC22.32■■□□□ 1.16
SH3RF2Q8TEC5 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.32■■□□□ 1.16
SH3RF2Q8TEC5 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SH3RF2Q8TEC5 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SH3RF2Q8TEC5 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.32■■□□□ 1.16
SH3RF2Q8TEC5 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SH3RF2Q8TEC5 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SH3RF2Q8TEC5 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SH3RF2Q8TEC5 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.31■■□□□ 1.16
SH3RF2Q8TEC5 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.31■■□□□ 1.16
SH3RF2Q8TEC5 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SH3RF2Q8TEC5 AC026185.1-201ENST00000445748 174 ntBASIC22.31■■□□□ 1.16
SH3RF2Q8TEC5 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.31■■□□□ 1.16
SH3RF2Q8TEC5 AC011767.1-201ENST00000617410 1153 ntBASIC22.31■■□□□ 1.16
SH3RF2Q8TEC5 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SH3RF2Q8TEC5 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SH3RF2Q8TEC5 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SH3RF2Q8TEC5 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SH3RF2Q8TEC5 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.3■■□□□ 1.16
SH3RF2Q8TEC5 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH3RF2Q8TEC5 LINC00526-201ENST00000581067 1875 ntBASIC22.3■■□□□ 1.16
SH3RF2Q8TEC5 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.3■■□□□ 1.16
SH3RF2Q8TEC5 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
SH3RF2Q8TEC5 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH3RF2Q8TEC5 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
SH3RF2Q8TEC5 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH3RF2Q8TEC5 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.3■■□□□ 1.16
SH3RF2Q8TEC5 HLA-L-209ENST00000420110 1011 ntBASIC22.3■■□□□ 1.16
SH3RF2Q8TEC5 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH3RF2Q8TEC5 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH3RF2Q8TEC5 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SH3RF2Q8TEC5 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.3■■□□□ 1.16
SH3RF2Q8TEC5 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH3RF2Q8TEC5 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
SH3RF2Q8TEC5 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH3RF2Q8TEC5 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.3■■□□□ 1.16
SH3RF2Q8TEC5 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
SH3RF2Q8TEC5 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
SH3RF2Q8TEC5 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.29■■□□□ 1.16
SH3RF2Q8TEC5 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
SH3RF2Q8TEC5 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.29■■□□□ 1.16
SH3RF2Q8TEC5 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.29■■□□□ 1.16
SH3RF2Q8TEC5 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SH3RF2Q8TEC5 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.29■■□□□ 1.16
SH3RF2Q8TEC5 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SH3RF2Q8TEC5 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.28■■□□□ 1.16
SH3RF2Q8TEC5 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
SH3RF2Q8TEC5 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.28■■□□□ 1.16
SH3RF2Q8TEC5 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.28■■□□□ 1.16
SH3RF2Q8TEC5 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC22.28■■□□□ 1.16
SH3RF2Q8TEC5 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.28■■□□□ 1.16
SH3RF2Q8TEC5 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.28■■□□□ 1.16
SH3RF2Q8TEC5 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SH3RF2Q8TEC5 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SH3RF2Q8TEC5 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
SH3RF2Q8TEC5 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
SH3RF2Q8TEC5 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SH3RF2Q8TEC5 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.28■■□□□ 1.16
SH3RF2Q8TEC5 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
SH3RF2Q8TEC5 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SH3RF2Q8TEC5 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.27■■□□□ 1.16
SH3RF2Q8TEC5 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SH3RF2Q8TEC5 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC22.27■■□□□ 1.16
SH3RF2Q8TEC5 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.27■■□□□ 1.16
SH3RF2Q8TEC5 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.27■■□□□ 1.16
SH3RF2Q8TEC5 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SH3RF2Q8TEC5 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SH3RF2Q8TEC5 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SH3RF2Q8TEC5 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SH3RF2Q8TEC5 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SH3RF2Q8TEC5 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.26■■□□□ 1.15
SH3RF2Q8TEC5 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH3RF2Q8TEC5 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SH3RF2Q8TEC5 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH3RF2Q8TEC5 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
SH3RF2Q8TEC5 C1orf229-201ENST00000623686 2258 ntBASIC22.26■■□□□ 1.15
SH3RF2Q8TEC5 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
SH3RF2Q8TEC5 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.26■■□□□ 1.15
SH3RF2Q8TEC5 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.26■■□□□ 1.15
SH3RF2Q8TEC5 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.26■■□□□ 1.15
SH3RF2Q8TEC5 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SH3RF2Q8TEC5 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
SH3RF2Q8TEC5 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH3RF2Q8TEC5 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH3RF2Q8TEC5 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.26■■□□□ 1.15
SH3RF2Q8TEC5 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
SH3RF2Q8TEC5 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms