Protein–RNA interactions for Protein: Q8ND25

ZNRF1, E3 ubiquitin-protein ligase ZNRF1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF1Q8ND25 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNRF1Q8ND25 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNRF1Q8ND25 AP004607.7-201ENST00000527152 1677 ntBASIC17.96■□□□□ 0.47
ZNRF1Q8ND25 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.96■□□□□ 0.47
ZNRF1Q8ND25 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZNRF1Q8ND25 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.96■□□□□ 0.47
ZNRF1Q8ND25 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.96■□□□□ 0.47
ZNRF1Q8ND25 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.96■□□□□ 0.47
ZNRF1Q8ND25 LINC00565-201ENST00000562710 2331 ntBASIC17.96■□□□□ 0.47
ZNRF1Q8ND25 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNRF1Q8ND25 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.96■□□□□ 0.47
ZNRF1Q8ND25 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNRF1Q8ND25 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
ZNRF1Q8ND25 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZNRF1Q8ND25 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNRF1Q8ND25 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNRF1Q8ND25 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNRF1Q8ND25 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNRF1Q8ND25 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.95■□□□□ 0.46
ZNRF1Q8ND25 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
ZNRF1Q8ND25 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.95■□□□□ 0.46
ZNRF1Q8ND25 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNRF1Q8ND25 IRS3P-201ENST00000223076 1006 ntBASIC17.95■□□□□ 0.46
ZNRF1Q8ND25 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNRF1Q8ND25 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNRF1Q8ND25 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNRF1Q8ND25 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.95■□□□□ 0.46
ZNRF1Q8ND25 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.95■□□□□ 0.46
ZNRF1Q8ND25 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
ZNRF1Q8ND25 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNRF1Q8ND25 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNRF1Q8ND25 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ZNRF1Q8ND25 FAM99A-202ENST00000538190 1989 ntBASIC17.95■□□□□ 0.46
ZNRF1Q8ND25 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNRF1Q8ND25 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNRF1Q8ND25 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZNRF1Q8ND25 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNRF1Q8ND25 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZNRF1Q8ND25 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.94■□□□□ 0.46
ZNRF1Q8ND25 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNRF1Q8ND25 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ZNRF1Q8ND25 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ZNRF1Q8ND25 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNRF1Q8ND25 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.94■□□□□ 0.46
ZNRF1Q8ND25 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.94■□□□□ 0.46
ZNRF1Q8ND25 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNRF1Q8ND25 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNRF1Q8ND25 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ZNRF1Q8ND25 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNRF1Q8ND25 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNRF1Q8ND25 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
ZNRF1Q8ND25 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNRF1Q8ND25 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZNRF1Q8ND25 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.93■□□□□ 0.46
ZNRF1Q8ND25 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.93■□□□□ 0.46
ZNRF1Q8ND25 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNRF1Q8ND25 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.93■□□□□ 0.46
ZNRF1Q8ND25 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.93■□□□□ 0.46
ZNRF1Q8ND25 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNRF1Q8ND25 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZNRF1Q8ND25 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.93■□□□□ 0.46
ZNRF1Q8ND25 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.93■□□□□ 0.46
ZNRF1Q8ND25 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.93■□□□□ 0.46
ZNRF1Q8ND25 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
ZNRF1Q8ND25 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.93■□□□□ 0.46
ZNRF1Q8ND25 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNRF1Q8ND25 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNRF1Q8ND25 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNRF1Q8ND25 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.92■□□□□ 0.46
ZNRF1Q8ND25 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.92■□□□□ 0.46
ZNRF1Q8ND25 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNRF1Q8ND25 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNRF1Q8ND25 ZNRF2P3-201ENST00000424200 374 ntBASIC17.92■□□□□ 0.46
ZNRF1Q8ND25 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.92■□□□□ 0.46
ZNRF1Q8ND25 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.92■□□□□ 0.46
ZNRF1Q8ND25 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.92■□□□□ 0.46
ZNRF1Q8ND25 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.92■□□□□ 0.46
ZNRF1Q8ND25 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.92■□□□□ 0.46
ZNRF1Q8ND25 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
ZNRF1Q8ND25 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
ZNRF1Q8ND25 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNRF1Q8ND25 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.92■□□□□ 0.46
ZNRF1Q8ND25 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNRF1Q8ND25 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNRF1Q8ND25 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
ZNRF1Q8ND25 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNRF1Q8ND25 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.91■□□□□ 0.46
ZNRF1Q8ND25 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNRF1Q8ND25 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNRF1Q8ND25 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.91■□□□□ 0.46
ZNRF1Q8ND25 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.91■□□□□ 0.46
ZNRF1Q8ND25 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.91■□□□□ 0.46
ZNRF1Q8ND25 AC012414.1-201ENST00000556676 535 ntBASIC17.91■□□□□ 0.46
ZNRF1Q8ND25 AL034346.1-201ENST00000568244 1277 ntBASIC17.91■□□□□ 0.46
ZNRF1Q8ND25 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.91■□□□□ 0.46
ZNRF1Q8ND25 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.91■□□□□ 0.46
ZNRF1Q8ND25 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.91■□□□□ 0.46
ZNRF1Q8ND25 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ZNRF1Q8ND25 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNRF1Q8ND25 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms