Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF169Q8NCN4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC23.37■■□□□ 1.33
RNF169Q8NCN4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.37■■□□□ 1.33
RNF169Q8NCN4 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.37■■□□□ 1.33
RNF169Q8NCN4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.37■■□□□ 1.33
RNF169Q8NCN4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.37■■□□□ 1.33
RNF169Q8NCN4 MFSD11-216ENST00000590393 1141 ntBASIC23.37■■□□□ 1.33
RNF169Q8NCN4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.37■■□□□ 1.33
RNF169Q8NCN4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.37■■□□□ 1.33
RNF169Q8NCN4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.37■■□□□ 1.33
RNF169Q8NCN4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF169Q8NCN4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.37■■□□□ 1.33
RNF169Q8NCN4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
RNF169Q8NCN4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.36■■□□□ 1.33
RNF169Q8NCN4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RNF169Q8NCN4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RNF169Q8NCN4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
RNF169Q8NCN4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.36■■□□□ 1.33
RNF169Q8NCN4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.36■■□□□ 1.33
RNF169Q8NCN4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RNF169Q8NCN4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
RNF169Q8NCN4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.36■■□□□ 1.33
RNF169Q8NCN4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.36■■□□□ 1.33
RNF169Q8NCN4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RNF169Q8NCN4 UBE2DNL-204ENST00000602536 740 ntBASIC23.36■■□□□ 1.33
RNF169Q8NCN4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC23.36■■□□□ 1.33
RNF169Q8NCN4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RNF169Q8NCN4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.36■■□□□ 1.33
RNF169Q8NCN4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
RNF169Q8NCN4 AC055733.4-201ENST00000638462 1354 ntBASIC23.36■■□□□ 1.33
RNF169Q8NCN4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RNF169Q8NCN4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RNF169Q8NCN4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RNF169Q8NCN4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RNF169Q8NCN4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.35■■□□□ 1.33
RNF169Q8NCN4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
RNF169Q8NCN4 AP001160.3-201ENST00000601484 763 ntBASIC23.35■■□□□ 1.33
RNF169Q8NCN4 AC104771.1-201ENST00000603335 964 ntBASIC23.35■■□□□ 1.33
RNF169Q8NCN4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.35■■□□□ 1.33
RNF169Q8NCN4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
RNF169Q8NCN4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RNF169Q8NCN4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RNF169Q8NCN4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF169Q8NCN4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
RNF169Q8NCN4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF169Q8NCN4 AL355802.2-201ENST00000402069 882 ntBASIC23.34■■□□□ 1.33
RNF169Q8NCN4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.34■■□□□ 1.33
RNF169Q8NCN4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.34■■□□□ 1.33
RNF169Q8NCN4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.34■■□□□ 1.33
RNF169Q8NCN4 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.34■■□□□ 1.33
RNF169Q8NCN4 AL109923.1-201ENST00000618799 583 ntBASIC23.34■■□□□ 1.33
RNF169Q8NCN4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
RNF169Q8NCN4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.33■■□□□ 1.33
RNF169Q8NCN4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RNF169Q8NCN4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
RNF169Q8NCN4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
RNF169Q8NCN4 LINC00526-201ENST00000581067 1875 ntBASIC23.33■■□□□ 1.33
RNF169Q8NCN4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.33■■□□□ 1.33
RNF169Q8NCN4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.33■■□□□ 1.33
RNF169Q8NCN4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.33■■□□□ 1.33
RNF169Q8NCN4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RNF169Q8NCN4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.32■■□□□ 1.32
RNF169Q8NCN4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RNF169Q8NCN4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF169Q8NCN4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF169Q8NCN4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF169Q8NCN4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
RNF169Q8NCN4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.32■■□□□ 1.32
RNF169Q8NCN4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.32■■□□□ 1.32
RNF169Q8NCN4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.32■■□□□ 1.32
RNF169Q8NCN4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
RNF169Q8NCN4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF169Q8NCN4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
RNF169Q8NCN4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RNF169Q8NCN4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RNF169Q8NCN4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.31■■□□□ 1.32
RNF169Q8NCN4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.31■■□□□ 1.32
RNF169Q8NCN4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
RNF169Q8NCN4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RNF169Q8NCN4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RNF169Q8NCN4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.31■■□□□ 1.32
RNF169Q8NCN4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
RNF169Q8NCN4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RNF169Q8NCN4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RNF169Q8NCN4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RNF169Q8NCN4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF169Q8NCN4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RNF169Q8NCN4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RNF169Q8NCN4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RNF169Q8NCN4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.3■■□□□ 1.32
RNF169Q8NCN4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF169Q8NCN4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF169Q8NCN4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF169Q8NCN4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.29■■□□□ 1.32
RNF169Q8NCN4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RNF169Q8NCN4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF169Q8NCN4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
RNF169Q8NCN4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF169Q8NCN4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RNF169Q8NCN4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms