Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDRT4Q8N9R6 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CDRT4Q8N9R6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.98■□□□□ 0.79
CDRT4Q8N9R6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDRT4Q8N9R6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDRT4Q8N9R6 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDRT4Q8N9R6 FBXW4P1-201ENST00000426721 2239 ntBASIC19.98■□□□□ 0.79
CDRT4Q8N9R6 AP004607.7-201ENST00000527152 1677 ntBASIC19.98■□□□□ 0.79
CDRT4Q8N9R6 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CDRT4Q8N9R6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDRT4Q8N9R6 AL136967.2-201ENST00000623968 743 ntBASIC19.98■□□□□ 0.79
CDRT4Q8N9R6 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDRT4Q8N9R6 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.98■□□□□ 0.79
CDRT4Q8N9R6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.98■□□□□ 0.79
CDRT4Q8N9R6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDRT4Q8N9R6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDRT4Q8N9R6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDRT4Q8N9R6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.97■□□□□ 0.79
CDRT4Q8N9R6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDRT4Q8N9R6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.97■□□□□ 0.79
CDRT4Q8N9R6 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.97■□□□□ 0.79
CDRT4Q8N9R6 SUDS3P1-201ENST00000505831 966 ntBASIC19.97■□□□□ 0.79
CDRT4Q8N9R6 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.97■□□□□ 0.79
CDRT4Q8N9R6 SMUG1P1-201ENST00000590640 811 ntBASIC19.97■□□□□ 0.79
CDRT4Q8N9R6 AC010542.4-201ENST00000563151 1910 ntBASIC19.97■□□□□ 0.79
CDRT4Q8N9R6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDRT4Q8N9R6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDRT4Q8N9R6 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDRT4Q8N9R6 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDRT4Q8N9R6 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.97■□□□□ 0.79
CDRT4Q8N9R6 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDRT4Q8N9R6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.96■□□□□ 0.79
CDRT4Q8N9R6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDRT4Q8N9R6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.96■□□□□ 0.79
CDRT4Q8N9R6 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDRT4Q8N9R6 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CDRT4Q8N9R6 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.96■□□□□ 0.79
CDRT4Q8N9R6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.96■□□□□ 0.79
CDRT4Q8N9R6 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDRT4Q8N9R6 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.96■□□□□ 0.79
CDRT4Q8N9R6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CDRT4Q8N9R6 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CDRT4Q8N9R6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDRT4Q8N9R6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDRT4Q8N9R6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDRT4Q8N9R6 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDRT4Q8N9R6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDRT4Q8N9R6 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDRT4Q8N9R6 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDRT4Q8N9R6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.95■□□□□ 0.78
CDRT4Q8N9R6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.95■□□□□ 0.78
CDRT4Q8N9R6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.95■□□□□ 0.78
CDRT4Q8N9R6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.95■□□□□ 0.78
CDRT4Q8N9R6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDRT4Q8N9R6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.95■□□□□ 0.78
CDRT4Q8N9R6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.95■□□□□ 0.78
CDRT4Q8N9R6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDRT4Q8N9R6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDRT4Q8N9R6 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDRT4Q8N9R6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDRT4Q8N9R6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
CDRT4Q8N9R6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.94■□□□□ 0.78
CDRT4Q8N9R6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
CDRT4Q8N9R6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CDRT4Q8N9R6 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDRT4Q8N9R6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDRT4Q8N9R6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.94■□□□□ 0.78
CDRT4Q8N9R6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CDRT4Q8N9R6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.93■□□□□ 0.78
CDRT4Q8N9R6 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDRT4Q8N9R6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDRT4Q8N9R6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDRT4Q8N9R6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDRT4Q8N9R6 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDRT4Q8N9R6 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
CDRT4Q8N9R6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDRT4Q8N9R6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CDRT4Q8N9R6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.93■□□□□ 0.78
CDRT4Q8N9R6 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDRT4Q8N9R6 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CDRT4Q8N9R6 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.93■□□□□ 0.78
CDRT4Q8N9R6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDRT4Q8N9R6 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.93■□□□□ 0.78
CDRT4Q8N9R6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.93■□□□□ 0.78
CDRT4Q8N9R6 AC142381.2-201ENST00000566120 298 ntBASIC19.93■□□□□ 0.78
CDRT4Q8N9R6 AC105233.4-201ENST00000642045 216 ntBASIC19.93■□□□□ 0.78
CDRT4Q8N9R6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.93■□□□□ 0.78
CDRT4Q8N9R6 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDRT4Q8N9R6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDRT4Q8N9R6 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.93■□□□□ 0.78
CDRT4Q8N9R6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.92■□□□□ 0.78
CDRT4Q8N9R6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDRT4Q8N9R6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDRT4Q8N9R6 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
CDRT4Q8N9R6 MIR572-201ENST00000384983 95 ntBASIC19.92■□□□□ 0.78
CDRT4Q8N9R6 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDRT4Q8N9R6 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.92■□□□□ 0.78
CDRT4Q8N9R6 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CDRT4Q8N9R6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDRT4Q8N9R6 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms