| MSL3 | Q8N5Y2 | DACT2-203 | ENST00000607983 | 1620 nt | APPRIS ALT2 TSL 1 (best) BASIC | 24.58 | ■■□□□ 1.53 | | |
| MSL3 | Q8N5Y2 | EFNA2-201 | ENST00000215368 | 949 nt | APPRIS P1 TSL 1 (best) BASIC | 24.58 | ■■□□□ 1.53 | | |
| MSL3 | Q8N5Y2 | AL731577.2-201 | ENST00000508096 | 555 nt | TSL 2 BASIC | 24.58 | ■■□□□ 1.53 | | |
| MSL3 | Q8N5Y2 | ZNF561-AS1-205 | ENST00000588765 | 579 nt | TSL 4 BASIC | 24.58 | ■■□□□ 1.53 | | |
| MSL3 | Q8N5Y2 | CCDC151-203 | ENST00000591179 | 1943 nt | TSL 1 (best) BASIC | 24.58 | ■■□□□ 1.53 | | |
| MSL3 | Q8N5Y2 | C19orf67-203 | ENST00000548523 | 1427 nt | APPRIS P2 TSL 5 BASIC | 24.58 | ■■□□□ 1.53 | | |
| MSL3 | Q8N5Y2 | UPF3A-201 | ENST00000351487 | 2235 nt | TSL 1 (best) BASIC | 24.58 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | NFE2L3P1-201 | ENST00000588207 | 1959 nt | BASIC | 24.58 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | CD58-203 | ENST00000457047 | 1328 nt | APPRIS ALT2 TSL 1 (best) BASIC | 24.58 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | IDI1-201 | ENST00000381344 | 2301 nt | APPRIS P1 TSL 1 (best) BASIC | 24.57 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | SLAIN1-213 | ENST00000466548 | 2637 nt | APPRIS ALT2 TSL 5 BASIC | 24.57 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | NKX2-4-201 | ENST00000351817 | 2238 nt | APPRIS P1 TSL 5 BASIC | 24.57 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | CITED1-201 | ENST00000246139 | 1231 nt | APPRIS P3 TSL 1 (best) BASIC | 24.57 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | MOB2-201 | ENST00000329957 | 1207 nt | APPRIS P1 TSL 2 BASIC | 24.57 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | MRPL37-201 | ENST00000336230 | 1179 nt | TSL 1 (best) BASIC | 24.57 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | DCTN3-202 | ENST00000341694 | 899 nt | TSL 1 (best) BASIC | 24.57 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | DCTN3-205 | ENST00000378916 | 773 nt | TSL 2 BASIC | 24.57 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | TFG-210 | ENST00000620299 | 1289 nt | TSL 5 BASIC | 24.57 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | AC233992.2-201 | ENST00000531225 | 1596 nt | APPRIS P1 TSL 2 BASIC | 24.57 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | ABHD12B-201 | ENST00000337334 | 1708 nt | APPRIS ALT2 TSL 1 (best) BASIC | 24.57 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | OSCAR-209 | ENST00000616215 | 2016 nt | APPRIS ALT2 TSL 5 BASIC | 24.57 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | ABCB10P4-201 | ENST00000566803 | 2184 nt | BASIC | 24.57 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | SHMT1-201 | ENST00000316694 | 2464 nt | APPRIS P1 TSL 1 (best) BASIC | 24.57 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | GNB2-209 | ENST00000436220 | 1479 nt | TSL 5 BASIC | 24.57 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | FAM171A2-201 | ENST00000293443 | 3160 nt | APPRIS P1 TSL 1 (best) BASIC | 24.56 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | SLC35D3-201 | ENST00000331858 | 2359 nt | APPRIS P1 TSL 1 (best) BASIC | 24.56 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | HRASLS5-201 | ENST00000301790 | 1166 nt | APPRIS P3 TSL 1 (best) BASIC | 24.56 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | SNRNP25-202 | ENST00000383018 | 1085 nt | APPRIS P2 TSL 1 (best) BASIC | 24.56 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | C19orf73-201 | ENST00000408991 | 744 nt | APPRIS P1 BASIC | 24.56 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | ABCC6P2-202 | ENST00000542005 | 706 nt | TSL 1 (best) BASIC | 24.56 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | C12orf75-205 | ENST00000549893 | 719 nt | TSL 3 BASIC | 24.56 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | AC044860.1-203 | ENST00000560811 | 844 nt | TSL 3 BASIC | 24.56 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | AC106820.5-201 | ENST00000566085 | 789 nt | TSL 3 BASIC | 24.56 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | MCRIP1-204 | ENST00000570507 | 765 nt | TSL 2 BASIC | 24.56 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | MCRIP1-208 | ENST00000575061 | 618 nt | TSL 5 BASIC | 24.56 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | ABCC6-204 | ENST00000575728 | 714 nt | TSL 1 (best) BASIC | 24.56 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | DM1-AS-203 | ENST00000590076 | 730 nt | TSL 4 BASIC | 24.56 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | ELOA3B-201 | ENST00000611323 | 1641 nt | APPRIS P1 BASIC | 24.56 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | ELOA3D-201 | ENST00000620881 | 1641 nt | APPRIS P1 BASIC | 24.56 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | ADARB2-202 | ENST00000381310 | 1810 nt | TSL 1 (best) BASIC | 24.56 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | CNTD2-202 | ENST00000430325 | 1817 nt | APPRIS P2 TSL 2 BASIC | 24.56 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | ZFP91-CNTF-201 | ENST00000389919 | 2319 nt | APPRIS P5 TSL 2 BASIC | 24.56 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | RAB3A-201 | ENST00000222256 | 1528 nt | APPRIS P1 TSL 1 (best) BASIC | 24.56 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | RNF223-201 | ENST00000453464 | 1902 nt | APPRIS P1 TSL 2 BASIC | 24.55 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | TNFRSF18-201 | ENST00000328596 | 851 nt | APPRIS P4 TSL 1 (best) BASIC | 24.55 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | KANSL1-AS1-201 | ENST00000398275 | 517 nt | TSL 1 (best) BASIC | 24.55 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | ABHD14A-204 | ENST00000491470 | 674 nt | TSL 3 BASIC | 24.55 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | AL691442.1-201 | ENST00000505139 | 1042 nt | APPRIS P1 TSL 2 BASIC | 24.55 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | AC142086.2-201 | ENST00000569753 | 217 nt | BASIC | 24.55 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | FNDC5-207 | ENST00000640867 | 639 nt | APPRIS P2 TSL 2 BASIC | 24.55 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | PARP9-207 | ENST00000492382 | 1837 nt | TSL 1 (best) BASIC | 24.55 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | ANTXR2-202 | ENST00000346652 | 1343 nt | TSL 1 (best) BASIC | 24.55 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | HMBS-201 | ENST00000278715 | 1501 nt | APPRIS P1 TSL 1 (best) BASIC | 24.55 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | MFF-207 | ENST00000409565 | 1548 nt | TSL 2 BASIC | 24.55 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | RYK-208 | ENST00000620660 | 2942 nt | APPRIS P3 TSL 1 (best) BASIC | 24.55 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | MAPK12-211 | ENST00000622558 | 1779 nt | TSL 1 (best) BASIC | 24.54 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | C6orf136-201 | ENST00000293604 | 1978 nt | TSL 1 (best) BASIC | 24.54 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | WDR86-201 | ENST00000334493 | 2023 nt | APPRIS P1 TSL 5 BASIC | 24.54 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | EPHA8-202 | ENST00000374644 | 1802 nt | TSL 1 (best) BASIC | 24.54 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | NFKBID-201 | ENST00000396901 | 1834 nt | APPRIS P2 TSL 1 (best) BASIC | 24.54 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | NFKBID-211 | ENST00000641389 | 1834 nt | APPRIS ALT2 BASIC | 24.54 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | LY6E-202 | ENST00000429120 | 1173 nt | APPRIS P2 TSL 1 (best) BASIC | 24.54 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | MVB12A-212 | ENST00000543795 | 1154 nt | APPRIS P1 TSL 5 BASIC | 24.54 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | DUX4L16-201 | ENST00000555130 | 1264 nt | BASIC | 24.54 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | AL121832.2-201 | ENST00000610979 | 668 nt | BASIC | 24.54 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | SLC25A29-201 | ENST00000359232 | 2385 nt | APPRIS P1 TSL 1 (best) BASIC | 24.54 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | SPON2-222 | ENST00000617421 | 2156 nt | APPRIS P1 TSL 5 BASIC | 24.54 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | MYCN-201 | ENST00000281043 | 2602 nt | APPRIS P1 TSL 5 BASIC | 24.54 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | SLC25A42-201 | ENST00000318596 | 3120 nt | APPRIS P1 TSL 1 (best) BASIC | 24.54 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | UBE2S-201 | ENST00000264552 | 2548 nt | APPRIS P1 TSL 1 (best) BASIC | 24.54 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | AOC3-207 | ENST00000617500 | 2392 nt | TSL 4 BASIC | 24.53 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | FZD8-201 | ENST00000374694 | 4030 nt | APPRIS P1 BASIC | 24.53 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | HMX1-202 | ENST00000506970 | 651 nt | TSL 1 (best) BASIC | 24.53 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | AC106738.1-201 | ENST00000560487 | 359 nt | TSL 3 BASIC | 24.53 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | PRMT1-221 | ENST00000610806 | 1192 nt | TSL 3 BASIC | 24.53 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | WT1-AS_3.1-201 | ENST00000613262 | 234 nt | BASIC | 24.53 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | RAB1A-202 | ENST00000409751 | 1333 nt | TSL 5 BASIC | 24.53 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | VDAC1-203 | ENST00000395047 | 1873 nt | APPRIS P1 TSL 1 (best) BASIC | 24.53 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | NIPSNAP1-201 | ENST00000216121 | 2237 nt | APPRIS P1 TSL 1 (best) BASIC | 24.53 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | TMEM259-202 | ENST00000356663 | 2748 nt | APPRIS ALT2 TSL 1 (best) BASIC | 24.52 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | VSTM4-201 | ENST00000298454 | 2170 nt | APPRIS P3 TSL 2 BASIC | 24.52 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | ACSF2-207 | ENST00000504392 | 1881 nt | TSL 2 BASIC | 24.52 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | PARP1-202 | ENST00000366792 | 553 nt | TSL 3 BASIC | 24.52 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | BX890604.1-207 | ENST00000486571 | 904 nt | TSL 5 BASIC | 24.52 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | MBD3L1-202 | ENST00000595891 | 872 nt | APPRIS P1 TSL 2 BASIC | 24.52 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | MMP25-204 | ENST00000612971 | 1017 nt | TSL 5 BASIC | 24.52 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | PARP1-210 | ENST00000629232 | 477 nt | TSL 5 BASIC | 24.52 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | DIXDC1-205 | ENST00000529225 | 1945 nt | TSL 5 BASIC | 24.52 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | TMEM102-202 | ENST00000396568 | 1962 nt | APPRIS P1 TSL 2 BASIC | 24.52 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | HSPB2-201 | ENST00000304298 | 1335 nt | APPRIS P1 TSL 1 (best) BASIC | 24.52 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | AC055733.4-201 | ENST00000638462 | 1354 nt | BASIC | 24.52 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | SAXO1-201 | ENST00000380530 | 1727 nt | APPRIS ALT2 TSL 2 BASIC | 24.52 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | SLC52A2-211 | ENST00000532887 | 2147 nt | APPRIS P1 TSL 5 BASIC | 24.52 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | IMPDH1-210 | ENST00000480861 | 1765 nt | APPRIS P2 TSL 2 BASIC | 24.52 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | TSPAN4-206 | ENST00000397408 | 1430 nt | APPRIS P1 TSL 2 BASIC | 24.52 | ■■□□□ 1.52 | | |
| MSL3 | Q8N5Y2 | PPP1R12C-201 | ENST00000263433 | 2924 nt | APPRIS P1 TSL 1 (best) BASIC | 24.51 | ■■□□□ 1.51 | | |
| MSL3 | Q8N5Y2 | DENND1A-201 | ENST00000373618 | 3003 nt | TSL 1 (best) BASIC | 24.51 | ■■□□□ 1.51 | | |
| MSL3 | Q8N5Y2 | PEX10-204 | ENST00000507596 | 1941 nt | APPRIS ALT1 TSL 5 BASIC | 24.51 | ■■□□□ 1.51 | | |
| MSL3 | Q8N5Y2 | ABHD6-201 | ENST00000295962 | 2393 nt | APPRIS P1 TSL 1 (best) BASIC | 24.51 | ■■□□□ 1.51 | | |
| MSL3 | Q8N5Y2 | ABHD17AP1-201 | ENST00000358206 | 933 nt | BASIC | 24.51 | ■■□□□ 1.51 | | |