Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C9orf40Q8IXQ3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C9orf40Q8IXQ3 ECEL1P1-201ENST00000373592 1742 ntBASIC19.89■□□□□ 0.77
C9orf40Q8IXQ3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
C9orf40Q8IXQ3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
C9orf40Q8IXQ3 AC034268.1-201ENST00000441047 882 ntBASIC19.89■□□□□ 0.77
C9orf40Q8IXQ3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
C9orf40Q8IXQ3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.89■□□□□ 0.77
C9orf40Q8IXQ3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.89■□□□□ 0.77
C9orf40Q8IXQ3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.89■□□□□ 0.77
C9orf40Q8IXQ3 AL117328.2-201ENST00000624617 1940 ntBASIC19.89■□□□□ 0.77
C9orf40Q8IXQ3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C9orf40Q8IXQ3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
C9orf40Q8IXQ3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.88■□□□□ 0.77
C9orf40Q8IXQ3 AP006587.3-201ENST00000525742 1516 ntBASIC19.88■□□□□ 0.77
C9orf40Q8IXQ3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
C9orf40Q8IXQ3 AC055733.4-201ENST00000638462 1354 ntBASIC19.88■□□□□ 0.77
C9orf40Q8IXQ3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
C9orf40Q8IXQ3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.88■□□□□ 0.77
C9orf40Q8IXQ3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.88■□□□□ 0.77
C9orf40Q8IXQ3 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.88■□□□□ 0.77
C9orf40Q8IXQ3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
C9orf40Q8IXQ3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
C9orf40Q8IXQ3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
C9orf40Q8IXQ3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.85■□□□□ 0.77
C9orf40Q8IXQ3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
C9orf40Q8IXQ3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
C9orf40Q8IXQ3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.85■□□□□ 0.77
C9orf40Q8IXQ3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
C9orf40Q8IXQ3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
C9orf40Q8IXQ3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.85■□□□□ 0.77
C9orf40Q8IXQ3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
C9orf40Q8IXQ3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
C9orf40Q8IXQ3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.85■□□□□ 0.77
C9orf40Q8IXQ3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
C9orf40Q8IXQ3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.85■□□□□ 0.77
C9orf40Q8IXQ3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 AL162430.1-201ENST00000480705 870 ntBASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
C9orf40Q8IXQ3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms