Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C9orf40Q8IXQ3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C9orf40Q8IXQ3 ECEL1P1-201ENST00000373592 1742 ntBASIC19.89■□□□□ 0.77
C9orf40Q8IXQ3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
C9orf40Q8IXQ3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
C9orf40Q8IXQ3 AC034268.1-201ENST00000441047 882 ntBASIC19.89■□□□□ 0.77
C9orf40Q8IXQ3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
C9orf40Q8IXQ3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.89■□□□□ 0.77
C9orf40Q8IXQ3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.89■□□□□ 0.77
C9orf40Q8IXQ3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.89■□□□□ 0.77
C9orf40Q8IXQ3 AL117328.2-201ENST00000624617 1940 ntBASIC19.89■□□□□ 0.77
C9orf40Q8IXQ3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C9orf40Q8IXQ3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
C9orf40Q8IXQ3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.88■□□□□ 0.77
C9orf40Q8IXQ3 AP006587.3-201ENST00000525742 1516 ntBASIC19.88■□□□□ 0.77
C9orf40Q8IXQ3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
C9orf40Q8IXQ3 AC055733.4-201ENST00000638462 1354 ntBASIC19.88■□□□□ 0.77
C9orf40Q8IXQ3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
C9orf40Q8IXQ3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.88■□□□□ 0.77
C9orf40Q8IXQ3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.88■□□□□ 0.77
C9orf40Q8IXQ3 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.88■□□□□ 0.77
C9orf40Q8IXQ3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
C9orf40Q8IXQ3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
C9orf40Q8IXQ3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.87■□□□□ 0.77
C9orf40Q8IXQ3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.86■□□□□ 0.77
C9orf40Q8IXQ3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
C9orf40Q8IXQ3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.85■□□□□ 0.77
C9orf40Q8IXQ3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
C9orf40Q8IXQ3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
C9orf40Q8IXQ3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.85■□□□□ 0.77
C9orf40Q8IXQ3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
C9orf40Q8IXQ3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
C9orf40Q8IXQ3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.85■□□□□ 0.77
C9orf40Q8IXQ3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
C9orf40Q8IXQ3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
C9orf40Q8IXQ3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.85■□□□□ 0.77
C9orf40Q8IXQ3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
C9orf40Q8IXQ3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.85■□□□□ 0.77
C9orf40Q8IXQ3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 AL162430.1-201ENST00000480705 870 ntBASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.84■□□□□ 0.77
C9orf40Q8IXQ3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
C9orf40Q8IXQ3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms