Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC026471.6-201ENST00000622954 1905 ntBASIC18.99■□□□□ 0.63
LINC00346Q8IVM7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
LINC00346Q8IVM7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LINC00346Q8IVM7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
LINC00346Q8IVM7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINC00346Q8IVM7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
LINC00346Q8IVM7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINC00346Q8IVM7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
LINC00346Q8IVM7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINC00346Q8IVM7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINC00346Q8IVM7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINC00346Q8IVM7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.98■□□□□ 0.63
LINC00346Q8IVM7 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.98■□□□□ 0.63
LINC00346Q8IVM7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
LINC00346Q8IVM7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINC00346Q8IVM7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LINC00346Q8IVM7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.98■□□□□ 0.63
LINC00346Q8IVM7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINC00346Q8IVM7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINC00346Q8IVM7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINC00346Q8IVM7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINC00346Q8IVM7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINC00346Q8IVM7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.97■□□□□ 0.63
LINC00346Q8IVM7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.97■□□□□ 0.63
LINC00346Q8IVM7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.97■□□□□ 0.63
LINC00346Q8IVM7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.97■□□□□ 0.63
LINC00346Q8IVM7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
LINC00346Q8IVM7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINC00346Q8IVM7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LINC00346Q8IVM7 AC026310.3-201ENST00000625186 2373 ntBASIC18.97■□□□□ 0.63
LINC00346Q8IVM7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINC00346Q8IVM7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
LINC00346Q8IVM7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.97■□□□□ 0.63
LINC00346Q8IVM7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LINC00346Q8IVM7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
LINC00346Q8IVM7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LINC00346Q8IVM7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.96■□□□□ 0.63
LINC00346Q8IVM7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
LINC00346Q8IVM7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
LINC00346Q8IVM7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
LINC00346Q8IVM7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.96■□□□□ 0.63
LINC00346Q8IVM7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LINC00346Q8IVM7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LINC00346Q8IVM7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
LINC00346Q8IVM7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
LINC00346Q8IVM7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LINC00346Q8IVM7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
LINC00346Q8IVM7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
LINC00346Q8IVM7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
LINC00346Q8IVM7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
LINC00346Q8IVM7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC00346Q8IVM7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.95■□□□□ 0.62
LINC00346Q8IVM7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LINC00346Q8IVM7 OXCT2P1-201ENST00000447263 1535 ntBASIC18.95■□□□□ 0.62
LINC00346Q8IVM7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.95■□□□□ 0.62
LINC00346Q8IVM7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC00346Q8IVM7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LINC00346Q8IVM7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LINC00346Q8IVM7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.95■□□□□ 0.62
LINC00346Q8IVM7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.95■□□□□ 0.62
LINC00346Q8IVM7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LINC00346Q8IVM7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC00346Q8IVM7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.95■□□□□ 0.62
LINC00346Q8IVM7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC00346Q8IVM7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC00346Q8IVM7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LINC00346Q8IVM7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC00346Q8IVM7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC00346Q8IVM7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC00346Q8IVM7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LINC00346Q8IVM7 UNC93B3-201ENST00000308076 687 ntBASIC18.94■□□□□ 0.62
LINC00346Q8IVM7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC00346Q8IVM7 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.94■□□□□ 0.62
LINC00346Q8IVM7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC00346Q8IVM7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LINC00346Q8IVM7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.94■□□□□ 0.62
LINC00346Q8IVM7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC00346Q8IVM7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC00346Q8IVM7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC00346Q8IVM7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC00346Q8IVM7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
LINC00346Q8IVM7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC00346Q8IVM7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC00346Q8IVM7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
LINC00346Q8IVM7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC00346Q8IVM7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
LINC00346Q8IVM7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LINC00346Q8IVM7 AC244015.2-201ENST00000616358 1861 ntBASIC18.93■□□□□ 0.62
LINC00346Q8IVM7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC00346Q8IVM7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC00346Q8IVM7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.93■□□□□ 0.62
LINC00346Q8IVM7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
LINC00346Q8IVM7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LINC00346Q8IVM7 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC00346Q8IVM7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC00346Q8IVM7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
LINC00346Q8IVM7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.93■□□□□ 0.62
LINC00346Q8IVM7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.93■□□□□ 0.62
LINC00346Q8IVM7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LINC00346Q8IVM7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms