Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
NPAS4Q8IUM7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
NPAS4Q8IUM7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NPAS4Q8IUM7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
NPAS4Q8IUM7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.19■■□□□ 1.3
NPAS4Q8IUM7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NPAS4Q8IUM7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NPAS4Q8IUM7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.19■■□□□ 1.3
NPAS4Q8IUM7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NPAS4Q8IUM7 EEF1DP3-203ENST00000566025 782 ntBASIC23.19■■□□□ 1.3
NPAS4Q8IUM7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
NPAS4Q8IUM7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
NPAS4Q8IUM7 AC013268.1-206ENST00000638368 961 ntBASIC23.19■■□□□ 1.3
NPAS4Q8IUM7 AC112229.1-201ENST00000639295 961 ntBASIC23.19■■□□□ 1.3
NPAS4Q8IUM7 AC133041.1-202ENST00000642053 222 ntBASIC23.19■■□□□ 1.3
NPAS4Q8IUM7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NPAS4Q8IUM7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
NPAS4Q8IUM7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
NPAS4Q8IUM7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NPAS4Q8IUM7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
NPAS4Q8IUM7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.18■■□□□ 1.3
NPAS4Q8IUM7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.18■■□□□ 1.3
NPAS4Q8IUM7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
NPAS4Q8IUM7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
NPAS4Q8IUM7 LINC00526-201ENST00000581067 1875 ntBASIC23.18■■□□□ 1.3
NPAS4Q8IUM7 AC073210.2-201ENST00000430369 194 ntBASIC23.18■■□□□ 1.3
NPAS4Q8IUM7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
NPAS4Q8IUM7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.18■■□□□ 1.3
NPAS4Q8IUM7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NPAS4Q8IUM7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NPAS4Q8IUM7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NPAS4Q8IUM7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NPAS4Q8IUM7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NPAS4Q8IUM7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.17■■□□□ 1.3
NPAS4Q8IUM7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
NPAS4Q8IUM7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
NPAS4Q8IUM7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NPAS4Q8IUM7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.17■■□□□ 1.3
NPAS4Q8IUM7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
NPAS4Q8IUM7 AC053503.5-201ENST00000601508 636 ntBASIC23.17■■□□□ 1.3
NPAS4Q8IUM7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
NPAS4Q8IUM7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC23.17■■□□□ 1.3
NPAS4Q8IUM7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NPAS4Q8IUM7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NPAS4Q8IUM7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NPAS4Q8IUM7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.16■■□□□ 1.3
NPAS4Q8IUM7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.16■■□□□ 1.3
NPAS4Q8IUM7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NPAS4Q8IUM7 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.16■■□□□ 1.3
NPAS4Q8IUM7 TERF1P5-201ENST00000477545 1207 ntBASIC23.16■■□□□ 1.3
NPAS4Q8IUM7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NPAS4Q8IUM7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.16■■□□□ 1.3
NPAS4Q8IUM7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.16■■□□□ 1.3
NPAS4Q8IUM7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
NPAS4Q8IUM7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
NPAS4Q8IUM7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NPAS4Q8IUM7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.16■■□□□ 1.3
NPAS4Q8IUM7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
NPAS4Q8IUM7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.15■■□□□ 1.3
NPAS4Q8IUM7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.15■■□□□ 1.3
NPAS4Q8IUM7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NPAS4Q8IUM7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NPAS4Q8IUM7 AP006587.3-201ENST00000525742 1516 ntBASIC23.15■■□□□ 1.3
NPAS4Q8IUM7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NPAS4Q8IUM7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.15■■□□□ 1.3
NPAS4Q8IUM7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NPAS4Q8IUM7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC23.15■■□□□ 1.3
NPAS4Q8IUM7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.15■■□□□ 1.3
NPAS4Q8IUM7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
NPAS4Q8IUM7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NPAS4Q8IUM7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
NPAS4Q8IUM7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.15■■□□□ 1.3
NPAS4Q8IUM7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
NPAS4Q8IUM7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
NPAS4Q8IUM7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC23.14■■□□□ 1.29
NPAS4Q8IUM7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NPAS4Q8IUM7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.14■■□□□ 1.29
NPAS4Q8IUM7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC23.14■■□□□ 1.29
NPAS4Q8IUM7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.14■■□□□ 1.29
NPAS4Q8IUM7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
NPAS4Q8IUM7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC23.14■■□□□ 1.29
NPAS4Q8IUM7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
NPAS4Q8IUM7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.13■■□□□ 1.29
NPAS4Q8IUM7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
NPAS4Q8IUM7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NPAS4Q8IUM7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.13■■□□□ 1.29
NPAS4Q8IUM7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC23.13■■□□□ 1.29
NPAS4Q8IUM7 AC098934.4-201ENST00000564127 592 ntBASIC23.13■■□□□ 1.29
NPAS4Q8IUM7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC23.13■■□□□ 1.29
NPAS4Q8IUM7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NPAS4Q8IUM7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NPAS4Q8IUM7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NPAS4Q8IUM7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.12■■□□□ 1.29
NPAS4Q8IUM7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NPAS4Q8IUM7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NPAS4Q8IUM7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
NPAS4Q8IUM7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NPAS4Q8IUM7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NPAS4Q8IUM7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NPAS4Q8IUM7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms