Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB43Q86YS6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB43Q86YS6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAB43Q86YS6 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.43■□□□□ 0.86
RAB43Q86YS6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB43Q86YS6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB43Q86YS6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.43■□□□□ 0.86
RAB43Q86YS6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB43Q86YS6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RAB43Q86YS6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB43Q86YS6 C1orf229-201ENST00000623686 2258 ntBASIC20.42■□□□□ 0.86
RAB43Q86YS6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB43Q86YS6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.42■□□□□ 0.86
RAB43Q86YS6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.42■□□□□ 0.86
RAB43Q86YS6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.42■□□□□ 0.86
RAB43Q86YS6 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.42■□□□□ 0.86
RAB43Q86YS6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB43Q86YS6 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB43Q86YS6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB43Q86YS6 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB43Q86YS6 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
RAB43Q86YS6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAB43Q86YS6 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB43Q86YS6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.41■□□□□ 0.86
RAB43Q86YS6 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAB43Q86YS6 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAB43Q86YS6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.41■□□□□ 0.86
RAB43Q86YS6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAB43Q86YS6 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB43Q86YS6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RAB43Q86YS6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB43Q86YS6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAB43Q86YS6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.41■□□□□ 0.86
RAB43Q86YS6 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB43Q86YS6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB43Q86YS6 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
RAB43Q86YS6 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.4■□□□□ 0.86
RAB43Q86YS6 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB43Q86YS6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.4■□□□□ 0.86
RAB43Q86YS6 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB43Q86YS6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB43Q86YS6 AC016769.1-201ENST00000409132 1010 ntBASIC20.4■□□□□ 0.86
RAB43Q86YS6 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.4■□□□□ 0.86
RAB43Q86YS6 OXCT2P1-201ENST00000447263 1535 ntBASIC20.4■□□□□ 0.86
RAB43Q86YS6 SMUG1P1-201ENST00000590640 811 ntBASIC20.4■□□□□ 0.86
RAB43Q86YS6 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.4■□□□□ 0.86
RAB43Q86YS6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB43Q86YS6 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.4■□□□□ 0.86
RAB43Q86YS6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.39■□□□□ 0.86
RAB43Q86YS6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RAB43Q86YS6 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.39■□□□□ 0.86
RAB43Q86YS6 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
RAB43Q86YS6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
RAB43Q86YS6 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.39■□□□□ 0.85
RAB43Q86YS6 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RAB43Q86YS6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.39■□□□□ 0.85
RAB43Q86YS6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB43Q86YS6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB43Q86YS6 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.39■□□□□ 0.85
RAB43Q86YS6 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB43Q86YS6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.39■□□□□ 0.85
RAB43Q86YS6 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.39■□□□□ 0.85
RAB43Q86YS6 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.39■□□□□ 0.85
RAB43Q86YS6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
RAB43Q86YS6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
RAB43Q86YS6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB43Q86YS6 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RAB43Q86YS6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB43Q86YS6 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB43Q86YS6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB43Q86YS6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.38■□□□□ 0.85
RAB43Q86YS6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.38■□□□□ 0.85
RAB43Q86YS6 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.38■□□□□ 0.85
RAB43Q86YS6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.38■□□□□ 0.85
RAB43Q86YS6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.38■□□□□ 0.85
RAB43Q86YS6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.38■□□□□ 0.85
RAB43Q86YS6 AC137761.2-201ENST00000561729 223 ntBASIC20.38■□□□□ 0.85
RAB43Q86YS6 AC145350.3-201ENST00000569033 163 ntBASIC20.38■□□□□ 0.85
RAB43Q86YS6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAB43Q86YS6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.38■□□□□ 0.85
RAB43Q86YS6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAB43Q86YS6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.38■□□□□ 0.85
RAB43Q86YS6 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.38■□□□□ 0.85
RAB43Q86YS6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.38■□□□□ 0.85
RAB43Q86YS6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB43Q86YS6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.37■□□□□ 0.85
RAB43Q86YS6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
RAB43Q86YS6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.37■□□□□ 0.85
RAB43Q86YS6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.37■□□□□ 0.85
RAB43Q86YS6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.37■□□□□ 0.85
RAB43Q86YS6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.37■□□□□ 0.85
RAB43Q86YS6 AC137767.1-201ENST00000602918 1920 ntBASIC20.37■□□□□ 0.85
RAB43Q86YS6 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB43Q86YS6 SLC25A24-204ENST00000569674 2357 ntBASIC20.36■□□□□ 0.85
RAB43Q86YS6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RAB43Q86YS6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB43Q86YS6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB43Q86YS6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RAB43Q86YS6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB43Q86YS6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms