Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC11.69□□□□□ -0.54
RNF213Q63HN8 OR10C1-204ENST00000622521 1039 ntBASIC11.69□□□□□ -0.54
RNF213Q63HN8 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RNF213Q63HN8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
RNF213Q63HN8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
RNF213Q63HN8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RNF213Q63HN8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RNF213Q63HN8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
RNF213Q63HN8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RNF213Q63HN8 KRT18P57-201ENST00000443599 1254 ntBASIC11.69□□□□□ -0.54
RNF213Q63HN8 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RNF213Q63HN8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RNF213Q63HN8 AC006557.6-201ENST00000623071 864 ntBASIC11.69□□□□□ -0.54
RNF213Q63HN8 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC11.69□□□□□ -0.54
RNF213Q63HN8 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC11.69□□□□□ -0.54
RNF213Q63HN8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RNF213Q63HN8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RNF213Q63HN8 AC087388.1-201ENST00000571370 1112 ntBASIC11.69□□□□□ -0.54
RNF213Q63HN8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC11.68□□□□□ -0.54
RNF213Q63HN8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC11.68□□□□□ -0.54
RNF213Q63HN8 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC11.68□□□□□ -0.54
RNF213Q63HN8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RNF213Q63HN8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RNF213Q63HN8 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC11.68□□□□□ -0.54
RNF213Q63HN8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RNF213Q63HN8 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
RNF213Q63HN8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC11.68□□□□□ -0.54
RNF213Q63HN8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC11.68□□□□□ -0.54
RNF213Q63HN8 TMEM202-AS1-202ENST00000565181 2325 ntBASIC11.68□□□□□ -0.54
RNF213Q63HN8 KRT17P2-201ENST00000300992 1314 ntBASIC11.68□□□□□ -0.54
RNF213Q63HN8 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RNF213Q63HN8 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC11.68□□□□□ -0.54
RNF213Q63HN8 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RNF213Q63HN8 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC11.68□□□□□ -0.54
RNF213Q63HN8 MIR6786-201ENST00000616843 113 ntBASIC11.68□□□□□ -0.54
RNF213Q63HN8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
RNF213Q63HN8 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RNF213Q63HN8 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
RNF213Q63HN8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC11.68□□□□□ -0.54
RNF213Q63HN8 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RNF213Q63HN8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
RNF213Q63HN8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RNF213Q63HN8 KRT18P48-201ENST00000434763 852 ntBASIC11.67□□□□□ -0.54
RNF213Q63HN8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC11.67□□□□□ -0.54
RNF213Q63HN8 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC11.67□□□□□ -0.54
RNF213Q63HN8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC11.67□□□□□ -0.54
RNF213Q63HN8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC11.67□□□□□ -0.54
RNF213Q63HN8 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RNF213Q63HN8 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
RNF213Q63HN8 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC11.67□□□□□ -0.54
RNF213Q63HN8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC11.67□□□□□ -0.54
RNF213Q63HN8 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC11.67□□□□□ -0.54
RNF213Q63HN8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC11.67□□□□□ -0.54
RNF213Q63HN8 AC073508.3-201ENST00000619697 1419 ntBASIC11.67□□□□□ -0.54
RNF213Q63HN8 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
RNF213Q63HN8 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
RNF213Q63HN8 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC11.67□□□□□ -0.54
RNF213Q63HN8 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC11.67□□□□□ -0.54
RNF213Q63HN8 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
RNF213Q63HN8 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC11.67□□□□□ -0.54
RNF213Q63HN8 AC004263.2-201ENST00000617183 678 ntBASIC11.67□□□□□ -0.54
RNF213Q63HN8 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC11.67□□□□□ -0.54
RNF213Q63HN8 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RNF213Q63HN8 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RNF213Q63HN8 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC11.66□□□□□ -0.54
RNF213Q63HN8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
RNF213Q63HN8 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC11.66□□□□□ -0.54
RNF213Q63HN8 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RNF213Q63HN8 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RNF213Q63HN8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC11.66□□□□□ -0.54
RNF213Q63HN8 CFL2-205ENST00000555765 632 ntTSL 2 BASIC11.66□□□□□ -0.54
RNF213Q63HN8 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RNF213Q63HN8 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
RNF213Q63HN8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC11.66□□□□□ -0.54
RNF213Q63HN8 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
RNF213Q63HN8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC11.66□□□□□ -0.54
RNF213Q63HN8 DUSP8P5-201ENST00000422884 1815 ntBASIC11.66□□□□□ -0.54
RNF213Q63HN8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RNF213Q63HN8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RNF213Q63HN8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RNF213Q63HN8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RNF213Q63HN8 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RNF213Q63HN8 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RNF213Q63HN8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC11.66□□□□□ -0.54
RNF213Q63HN8 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
RNF213Q63HN8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC11.65□□□□□ -0.54
RNF213Q63HN8 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC11.65□□□□□ -0.54
RNF213Q63HN8 GATS-209ENST00000454084 1030 ntTSL 3 BASIC11.65□□□□□ -0.54
RNF213Q63HN8 AC006538.3-201ENST00000612495 578 ntBASIC11.65□□□□□ -0.54
RNF213Q63HN8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RNF213Q63HN8 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RNF213Q63HN8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
RNF213Q63HN8 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
RNF213Q63HN8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
RNF213Q63HN8 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
RNF213Q63HN8 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
RNF213Q63HN8 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC11.65□□□□□ -0.54
RNF213Q63HN8 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
RNF213Q63HN8 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RNF213Q63HN8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms