Protein–RNA interactions for Protein: Q1ZZU3

SWI5, DNA repair protein SWI5 homolog, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWI5Q1ZZU3 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.84■□□□□ 0.61
SWI5Q1ZZU3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SWI5Q1ZZU3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SWI5Q1ZZU3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SWI5Q1ZZU3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.84■□□□□ 0.61
SWI5Q1ZZU3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.84■□□□□ 0.61
SWI5Q1ZZU3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SWI5Q1ZZU3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SWI5Q1ZZU3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SWI5Q1ZZU3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SWI5Q1ZZU3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SWI5Q1ZZU3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.84■□□□□ 0.61
SWI5Q1ZZU3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SWI5Q1ZZU3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
SWI5Q1ZZU3 AC104564.3-201ENST00000582367 638 ntBASIC18.84■□□□□ 0.61
SWI5Q1ZZU3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.84■□□□□ 0.61
SWI5Q1ZZU3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SWI5Q1ZZU3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SWI5Q1ZZU3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
SWI5Q1ZZU3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SWI5Q1ZZU3 AC138932.1-201ENST00000534164 6830 ntBASIC18.84■□□□□ 0.61
SWI5Q1ZZU3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SWI5Q1ZZU3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SWI5Q1ZZU3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.84■□□□□ 0.61
SWI5Q1ZZU3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.84■□□□□ 0.61
SWI5Q1ZZU3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SWI5Q1ZZU3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.83■□□□□ 0.61
SWI5Q1ZZU3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
SWI5Q1ZZU3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.83■□□□□ 0.61
SWI5Q1ZZU3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SWI5Q1ZZU3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SWI5Q1ZZU3 AC027612.3-201ENST00000413684 1047 ntBASIC18.83■□□□□ 0.6
SWI5Q1ZZU3 YBX1P1-201ENST00000445822 960 ntBASIC18.83■□□□□ 0.6
SWI5Q1ZZU3 AL354811.1-201ENST00000610286 706 ntBASIC18.83■□□□□ 0.6
SWI5Q1ZZU3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SWI5Q1ZZU3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SWI5Q1ZZU3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
SWI5Q1ZZU3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SWI5Q1ZZU3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SWI5Q1ZZU3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SWI5Q1ZZU3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SWI5Q1ZZU3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SWI5Q1ZZU3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SWI5Q1ZZU3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SWI5Q1ZZU3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SWI5Q1ZZU3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.82■□□□□ 0.6
SWI5Q1ZZU3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.82■□□□□ 0.6
SWI5Q1ZZU3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.82■□□□□ 0.6
SWI5Q1ZZU3 AL162430.1-201ENST00000480705 870 ntBASIC18.82■□□□□ 0.6
SWI5Q1ZZU3 AC012414.1-201ENST00000556676 535 ntBASIC18.82■□□□□ 0.6
SWI5Q1ZZU3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SWI5Q1ZZU3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SWI5Q1ZZU3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SWI5Q1ZZU3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SWI5Q1ZZU3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SWI5Q1ZZU3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.81■□□□□ 0.6
SWI5Q1ZZU3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SWI5Q1ZZU3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SWI5Q1ZZU3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SWI5Q1ZZU3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SWI5Q1ZZU3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
SWI5Q1ZZU3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SWI5Q1ZZU3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.81■□□□□ 0.6
SWI5Q1ZZU3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.81■□□□□ 0.6
SWI5Q1ZZU3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.81■□□□□ 0.6
SWI5Q1ZZU3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SWI5Q1ZZU3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.81■□□□□ 0.6
SWI5Q1ZZU3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.81■□□□□ 0.6
SWI5Q1ZZU3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SWI5Q1ZZU3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SWI5Q1ZZU3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SWI5Q1ZZU3 AC004687.1-201ENST00000579003 1625 ntBASIC18.81■□□□□ 0.6
SWI5Q1ZZU3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
SWI5Q1ZZU3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SWI5Q1ZZU3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.81■□□□□ 0.6
SWI5Q1ZZU3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.81■□□□□ 0.6
SWI5Q1ZZU3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SWI5Q1ZZU3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SWI5Q1ZZU3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SWI5Q1ZZU3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SWI5Q1ZZU3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SWI5Q1ZZU3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SWI5Q1ZZU3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SWI5Q1ZZU3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SWI5Q1ZZU3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.8■□□□□ 0.6
SWI5Q1ZZU3 AC123595.1-201ENST00000440769 1046 ntBASIC18.8■□□□□ 0.6
SWI5Q1ZZU3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.8■□□□□ 0.6
SWI5Q1ZZU3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SWI5Q1ZZU3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SWI5Q1ZZU3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SWI5Q1ZZU3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SWI5Q1ZZU3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SWI5Q1ZZU3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SWI5Q1ZZU3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SWI5Q1ZZU3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
SWI5Q1ZZU3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SWI5Q1ZZU3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SWI5Q1ZZU3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SWI5Q1ZZU3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SWI5Q1ZZU3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms