Protein–RNA interactions for Protein: Q06406

LSM6, U6 snRNA-associated Sm-like protein LSm6, yeastyeast

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM6Q06406 SHQ1YIL104C 1524 nt2.03□□□□□ -2.08
LSM6Q06406 MET5YJR137C 4329 nt2.03□□□□□ -2.08
LSM6Q06406 CMR3YPR013C 954 nt2.03□□□□□ -2.08
LSM6Q06406 RPA190YOR341W 4995 nt2.03□□□□□ -2.08
LSM6Q06406 YDR239CYDR239C 2364 nt2.03□□□□□ -2.08
LSM6Q06406 ICR1ICR1 3199 nt2.03□□□□□ -2.08
LSM6Q06406 CAF120YNL278W 3183 nt2.03□□□□□ -2.08
LSM6Q06406 PHO5YBR093C 1404 nt2.02□□□□□ -2.09
LSM6Q06406 NDC80YIL144W 2076 nt2.02□□□□□ -2.09
LSM6Q06406 SSL1YLR005W 1386 nt2.02□□□□□ -2.09
LSM6Q06406 RGC1YPR115W 3252 nt2.02□□□□□ -2.09
LSM6Q06406 FIN1YDR130C 876 nt2.02□□□□□ -2.09
LSM6Q06406 EAF5YEL018W 840 nt2.02□□□□□ -2.09
LSM6Q06406 YER079C-AYER079C-A 339 nt2.02□□□□□ -2.09
LSM6Q06406 AST2YER101C 1293 nt2.02□□□□□ -2.09
LSM6Q06406 CNN1YFR046C 1086 nt2.02□□□□□ -2.09
LSM6Q06406 YIL086CYIL086C 309 nt2.02□□□□□ -2.09
LSM6Q06406 ATG27YJL178C 816 nt2.02□□□□□ -2.09
LSM6Q06406 YMR122W-AYMR122W-A 255 nt2.02□□□□□ -2.09
LSM6Q06406 KTI11YBL071W-A 249 nt2.02□□□□□ -2.09
LSM6Q06406 RSM19YNR037C 276 nt2.02□□□□□ -2.09
LSM6Q06406 PSF3YOL146W 585 nt2.02□□□□□ -2.09
LSM6Q06406 TAF14YPL129W 735 nt2.02□□□□□ -2.09
LSM6Q06406 RPL33AYPL143W 324 nt2.02□□□□□ -2.09
LSM6Q06406 COP1YDL145C 3606 nt2.02□□□□□ -2.09
LSM6Q06406 SPF1YEL031W 3648 nt2.02□□□□□ -2.09
LSM6Q06406 PEX6YNL329C 3093 nt2.01□□□□□ -2.09
LSM6Q06406 CDC10YCR002C 969 nt2.01□□□□□ -2.09
LSM6Q06406 PAN5YHR063C 1140 nt2.01□□□□□ -2.09
LSM6Q06406 SOL3YHR163W 750 nt2.01□□□□□ -2.09
LSM6Q06406 PRM9YAR031W 897 nt2.01□□□□□ -2.09
LSM6Q06406 BUR2YLR226W 1188 nt2.01□□□□□ -2.09
LSM6Q06406 REC102YLR329W 795 nt2.01□□□□□ -2.09
LSM6Q06406 RRG9YNL213C 645 nt2.01□□□□□ -2.09
LSM6Q06406 RPL23AYBL087C 414 nt2.01□□□□□ -2.09
LSM6Q06406 TUM1YOR251C 915 nt2.01□□□□□ -2.09
LSM6Q06406 NET1YJL076W 3570 nt2.01□□□□□ -2.09
LSM6Q06406 AKR1YDR264C 2295 nt2.01□□□□□ -2.09
LSM6Q06406 CUS1YMR240C 1311 nt2□□□□□ -2.09
LSM6Q06406 ERP3YDL018C 678 nt2□□□□□ -2.09
LSM6Q06406 MRH1YDR033W 963 nt2□□□□□ -2.09
LSM6Q06406 tK(UUU)DtK(UUU)D 73 nt2□□□□□ -2.09
LSM6Q06406 tK(UUU)G1tK(UUU)G1 73 nt2□□□□□ -2.09
LSM6Q06406 tK(UUU)G2tK(UUU)G2 73 nt2□□□□□ -2.09
LSM6Q06406 tK(UUU)KtK(UUU)K 73 nt2□□□□□ -2.09
LSM6Q06406 tK(UUU)LtK(UUU)L 73 nt2□□□□□ -2.09
LSM6Q06406 tK(UUU)OtK(UUU)O 73 nt2□□□□□ -2.09
LSM6Q06406 tK(UUU)PtK(UUU)P 73 nt2□□□□□ -2.09
LSM6Q06406 YIP5YGL161C 933 nt2□□□□□ -2.09
LSM6Q06406 DID4YKL002W 699 nt2□□□□□ -2.09
LSM6Q06406 DSC2YOL073C 969 nt2□□□□□ -2.09
LSM6Q06406 VHR2YER064C 1518 nt2□□□□□ -2.09
LSM6Q06406 ILS1YBL076C 3219 nt2□□□□□ -2.09
LSM6Q06406 MLH1YMR167W 2310 nt2□□□□□ -2.09
LSM6Q06406 MRS2YOR334W 1413 nt2□□□□□ -2.09
LSM6Q06406 MGA1YGR249W 1371 nt1.99□□□□□ -2.09
LSM6Q06406 YDR034C-DYDR034C-D 5313 nt1.99□□□□□ -2.09
LSM6Q06406 YDR210W-BYDR210W-B 5313 nt1.99□□□□□ -2.09
LSM6Q06406 YLR410W-BYLR410W-B 5313 nt1.99□□□□□ -2.09
LSM6Q06406 ATP25YMR098C 1839 nt1.99□□□□□ -2.09
LSM6Q06406 BCK1YJL095W 4437 nt1.99□□□□□ -2.09
LSM6Q06406 OAF3YKR064W 2592 nt1.99□□□□□ -2.09
LSM6Q06406 RCR2YDR003W 633 nt1.99□□□□□ -2.09
LSM6Q06406 CDC26YFR036W 375 nt1.99□□□□□ -2.09
LSM6Q06406 MST27YGL051W 705 nt1.99□□□□□ -2.09
LSM6Q06406 RPL24BYGR148C 468 nt1.99□□□□□ -2.09
LSM6Q06406 CFD1YIL003W 882 nt1.99□□□□□ -2.09
LSM6Q06406 YLR124WYLR124W 345 nt1.99□□□□□ -2.09
LSM6Q06406 PEX12YMR026C 1200 nt1.99□□□□□ -2.09
LSM6Q06406 YPR015CYPR015C 744 nt1.99□□□□□ -2.09
LSM6Q06406 JID1YPR061C 906 nt1.99□□□□□ -2.09
LSM6Q06406 MRPL51YPR100W 423 nt1.99□□□□□ -2.09
LSM6Q06406 PRE2YPR103W 864 nt1.99□□□□□ -2.09
LSM6Q06406 VBA4YDR119W 2307 nt1.99□□□□□ -2.09
LSM6Q06406 YGR237CYGR237C 2358 nt1.98□□□□□ -2.09
LSM6Q06406 WBP1YEL002C 1293 nt1.98□□□□□ -2.09
LSM6Q06406 YGR293CYGR293C 462 nt1.98□□□□□ -2.09
LSM6Q06406 FMC1YIL098C 468 nt1.98□□□□□ -2.09
LSM6Q06406 GLG2YJL137C 1143 nt1.98□□□□□ -2.09
LSM6Q06406 RET3YPL010W 570 nt1.98□□□□□ -2.09
LSM6Q06406 ACM1YPL267W 630 nt1.98□□□□□ -2.09
LSM6Q06406 NRG2YBR066C 663 nt1.98□□□□□ -2.09
LSM6Q06406 YBR089WYBR089W 600 nt1.98□□□□□ -2.09
LSM6Q06406 SPB4YFL002C 1821 nt1.98□□□□□ -2.09
LSM6Q06406 UTP15YMR093W 1542 nt1.97□□□□□ -2.09
LSM6Q06406 RPL17BYJL177W 555 nt1.97□□□□□ -2.09
LSM6Q06406 YJL211CYJL211C 444 nt1.97□□□□□ -2.09
LSM6Q06406 DCS1YLR270W 1053 nt1.97□□□□□ -2.09
LSM6Q06406 YNL181WYNL181W 1224 nt1.97□□□□□ -2.09
LSM6Q06406 NDJ1YOL104C 1059 nt1.97□□□□□ -2.09
LSM6Q06406 YPR027CYPR027C 834 nt1.97□□□□□ -2.09
LSM6Q06406 TIP41YPR040W 1071 nt1.97□□□□□ -2.09
LSM6Q06406 YPR050CYPR050C 414 nt1.97□□□□□ -2.09
LSM6Q06406 APM1YPL259C 1428 nt1.97□□□□□ -2.09
LSM6Q06406 SGM1YJR134C 2124 nt1.97□□□□□ -2.09
LSM6Q06406 TRM1YDR120C 1713 nt1.97□□□□□ -2.09
LSM6Q06406 PRP31YGR091W 1485 nt1.96□□□□□ -2.1
LSM6Q06406 GPP2YER062C 753 nt1.96□□□□□ -2.1
LSM6Q06406 tL(UAG)JtL(UAG)J 82 nt1.96□□□□□ -2.1
LSM6Q06406 tL(UAG)L1tL(UAG)L1 82 nt1.96□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 20.3 ms