Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HMGCS1Q01581 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.68■□□□□ 0.9
HMGCS1Q01581 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMGCS1Q01581 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMGCS1Q01581 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMGCS1Q01581 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
HMGCS1Q01581 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMGCS1Q01581 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMGCS1Q01581 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMGCS1Q01581 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMGCS1Q01581 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HMGCS1Q01581 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.67■□□□□ 0.9
HMGCS1Q01581 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMGCS1Q01581 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMGCS1Q01581 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HMGCS1Q01581 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.67■□□□□ 0.9
HMGCS1Q01581 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
HMGCS1Q01581 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HMGCS1Q01581 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HMGCS1Q01581 SLC47A1P1-202ENST00000449666 945 ntBASIC20.67■□□□□ 0.9
HMGCS1Q01581 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMGCS1Q01581 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMGCS1Q01581 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMGCS1Q01581 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HMGCS1Q01581 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCS1Q01581 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCS1Q01581 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCS1Q01581 AL136116.3-201ENST00000402907 1138 ntBASIC20.66■□□□□ 0.9
HMGCS1Q01581 AC011298.3-201ENST00000615796 283 ntBASIC20.66■□□□□ 0.9
HMGCS1Q01581 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCS1Q01581 AC008406.3-201ENST00000620001 1374 ntBASIC20.66■□□□□ 0.9
HMGCS1Q01581 OXCT2P1-201ENST00000447263 1535 ntBASIC20.66■□□□□ 0.9
HMGCS1Q01581 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCS1Q01581 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
HMGCS1Q01581 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.66■□□□□ 0.9
HMGCS1Q01581 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCS1Q01581 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCS1Q01581 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.65■□□□□ 0.9
HMGCS1Q01581 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.65■□□□□ 0.9
HMGCS1Q01581 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCS1Q01581 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCS1Q01581 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCS1Q01581 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.65■□□□□ 0.9
HMGCS1Q01581 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCS1Q01581 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCS1Q01581 AC005229.4-201ENST00000610085 2198 ntBASIC20.65■□□□□ 0.9
HMGCS1Q01581 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCS1Q01581 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
HMGCS1Q01581 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.9
HMGCS1Q01581 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
HMGCS1Q01581 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HMGCS1Q01581 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
HMGCS1Q01581 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.64■□□□□ 0.89
HMGCS1Q01581 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.64■□□□□ 0.89
HMGCS1Q01581 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.64■□□□□ 0.89
HMGCS1Q01581 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
HMGCS1Q01581 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMGCS1Q01581 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.64■□□□□ 0.89
HMGCS1Q01581 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMGCS1Q01581 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMGCS1Q01581 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
HMGCS1Q01581 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCS1Q01581 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCS1Q01581 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
HMGCS1Q01581 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCS1Q01581 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
HMGCS1Q01581 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.63■□□□□ 0.89
HMGCS1Q01581 Z98882.1-201ENST00000622160 2253 ntBASIC20.63■□□□□ 0.89
HMGCS1Q01581 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.63■□□□□ 0.89
HMGCS1Q01581 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCS1Q01581 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCS1Q01581 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.63■□□□□ 0.89
HMGCS1Q01581 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCS1Q01581 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
HMGCS1Q01581 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.62■□□□□ 0.89
HMGCS1Q01581 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCS1Q01581 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCS1Q01581 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCS1Q01581 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCS1Q01581 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCS1Q01581 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.62■□□□□ 0.89
HMGCS1Q01581 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.62■□□□□ 0.89
HMGCS1Q01581 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCS1Q01581 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.62■□□□□ 0.89
HMGCS1Q01581 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCS1Q01581 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
HMGCS1Q01581 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCS1Q01581 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.62■□□□□ 0.89
HMGCS1Q01581 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMGCS1Q01581 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
HMGCS1Q01581 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMGCS1Q01581 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.61■□□□□ 0.89
HMGCS1Q01581 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMGCS1Q01581 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMGCS1Q01581 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMGCS1Q01581 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
HMGCS1Q01581 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HMGCS1Q01581 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMGCS1Q01581 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HMGCS1Q01581 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms