Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.84■□□□□ 0.61
UBE2NP61088 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE2NP61088 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE2NP61088 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UBE2NP61088 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE2NP61088 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE2NP61088 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
UBE2NP61088 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE2NP61088 MIR5787-201ENST00000611784 55 ntBASIC18.84■□□□□ 0.61
UBE2NP61088 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.84■□□□□ 0.61
UBE2NP61088 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE2NP61088 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE2NP61088 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE2NP61088 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBE2NP61088 AC009237.3-201ENST00000393279 1427 ntBASIC18.83■□□□□ 0.61
UBE2NP61088 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
UBE2NP61088 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBE2NP61088 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
UBE2NP61088 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
UBE2NP61088 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBE2NP61088 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBE2NP61088 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBE2NP61088 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UBE2NP61088 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.83■□□□□ 0.6
UBE2NP61088 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.83■□□□□ 0.6
UBE2NP61088 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UBE2NP61088 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.83■□□□□ 0.6
UBE2NP61088 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.83■□□□□ 0.6
UBE2NP61088 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
UBE2NP61088 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBE2NP61088 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBE2NP61088 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
UBE2NP61088 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBE2NP61088 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE2NP61088 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE2NP61088 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBE2NP61088 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE2NP61088 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBE2NP61088 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBE2NP61088 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.82■□□□□ 0.6
UBE2NP61088 AC026271.2-201ENST00000428091 497 ntBASIC18.82■□□□□ 0.6
UBE2NP61088 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.82■□□□□ 0.6
UBE2NP61088 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
UBE2NP61088 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.82■□□□□ 0.6
UBE2NP61088 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.82■□□□□ 0.6
UBE2NP61088 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE2NP61088 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBE2NP61088 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
UBE2NP61088 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE2NP61088 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE2NP61088 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBE2NP61088 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE2NP61088 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.81■□□□□ 0.6
UBE2NP61088 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE2NP61088 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
UBE2NP61088 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.81■□□□□ 0.6
UBE2NP61088 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE2NP61088 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.81■□□□□ 0.6
UBE2NP61088 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBE2NP61088 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBE2NP61088 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
UBE2NP61088 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBE2NP61088 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.81■□□□□ 0.6
UBE2NP61088 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.81■□□□□ 0.6
UBE2NP61088 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.81■□□□□ 0.6
UBE2NP61088 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.81■□□□□ 0.6
UBE2NP61088 AC233723.2-201ENST00000623798 2106 ntBASIC18.81■□□□□ 0.6
UBE2NP61088 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE2NP61088 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
UBE2NP61088 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBE2NP61088 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE2NP61088 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE2NP61088 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.8■□□□□ 0.6
UBE2NP61088 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
UBE2NP61088 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
UBE2NP61088 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBE2NP61088 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBE2NP61088 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBE2NP61088 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.8■□□□□ 0.6
UBE2NP61088 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
UBE2NP61088 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.8■□□□□ 0.6
UBE2NP61088 AC087623.3-201ENST00000607047 1098 ntBASIC18.8■□□□□ 0.6
UBE2NP61088 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.8■□□□□ 0.6
UBE2NP61088 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBE2NP61088 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBE2NP61088 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBE2NP61088 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.8■□□□□ 0.6
UBE2NP61088 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBE2NP61088 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.79■□□□□ 0.6
UBE2NP61088 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.79■□□□□ 0.6
UBE2NP61088 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2NP61088 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2NP61088 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2NP61088 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2NP61088 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2NP61088 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2NP61088 AC034268.1-201ENST00000441047 882 ntBASIC18.79■□□□□ 0.6
UBE2NP61088 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.79■□□□□ 0.6
UBE2NP61088 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.79■□□□□ 0.6
UBE2NP61088 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms