Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 AP004607.7-201ENST00000527152 1677 ntBASIC20.93■□□□□ 0.94
AP1S2P56377 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP1S2P56377 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.92■□□□□ 0.94
AP1S2P56377 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP1S2P56377 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP1S2P56377 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.92■□□□□ 0.94
AP1S2P56377 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP1S2P56377 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.92■□□□□ 0.94
AP1S2P56377 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
AP1S2P56377 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP1S2P56377 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.92■□□□□ 0.94
AP1S2P56377 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
AP1S2P56377 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.92■□□□□ 0.94
AP1S2P56377 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP1S2P56377 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP1S2P56377 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.92■□□□□ 0.94
AP1S2P56377 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP1S2P56377 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
AP1S2P56377 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP1S2P56377 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP1S2P56377 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
AP1S2P56377 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.91■□□□□ 0.94
AP1S2P56377 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.91■□□□□ 0.94
AP1S2P56377 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.91■□□□□ 0.94
AP1S2P56377 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
AP1S2P56377 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.91■□□□□ 0.94
AP1S2P56377 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.91■□□□□ 0.94
AP1S2P56377 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.91■□□□□ 0.94
AP1S2P56377 AC010542.4-201ENST00000563151 1910 ntBASIC20.91■□□□□ 0.94
AP1S2P56377 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
AP1S2P56377 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP1S2P56377 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP1S2P56377 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP1S2P56377 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP1S2P56377 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.9■□□□□ 0.94
AP1S2P56377 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP1S2P56377 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP1S2P56377 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
AP1S2P56377 FBXW4P1-201ENST00000426721 2239 ntBASIC20.9■□□□□ 0.94
AP1S2P56377 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP1S2P56377 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP1S2P56377 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP1S2P56377 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP1S2P56377 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
AP1S2P56377 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
AP1S2P56377 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
AP1S2P56377 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
AP1S2P56377 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
AP1S2P56377 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
AP1S2P56377 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
AP1S2P56377 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
AP1S2P56377 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.89■□□□□ 0.93
AP1S2P56377 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
AP1S2P56377 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
AP1S2P56377 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.89■□□□□ 0.93
AP1S2P56377 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
AP1S2P56377 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.93
AP1S2P56377 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
AP1S2P56377 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
AP1S2P56377 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP1S2P56377 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.88■□□□□ 0.93
AP1S2P56377 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP1S2P56377 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
AP1S2P56377 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.88■□□□□ 0.93
AP1S2P56377 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP1S2P56377 MIR572-201ENST00000384983 95 ntBASIC20.88■□□□□ 0.93
AP1S2P56377 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP1S2P56377 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.88■□□□□ 0.93
AP1S2P56377 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.88■□□□□ 0.93
AP1S2P56377 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.88■□□□□ 0.93
AP1S2P56377 AC142381.2-201ENST00000566120 298 ntBASIC20.88■□□□□ 0.93
AP1S2P56377 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP1S2P56377 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP1S2P56377 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.88■□□□□ 0.93
AP1S2P56377 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.87■□□□□ 0.93
AP1S2P56377 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
AP1S2P56377 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP1S2P56377 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP1S2P56377 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP1S2P56377 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP1S2P56377 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
AP1S2P56377 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
AP1S2P56377 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
AP1S2P56377 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP1S2P56377 AC105233.4-201ENST00000642045 216 ntBASIC20.87■□□□□ 0.93
AP1S2P56377 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
AP1S2P56377 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
AP1S2P56377 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.87■□□□□ 0.93
AP1S2P56377 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
AP1S2P56377 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP1S2P56377 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP1S2P56377 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP1S2P56377 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
AP1S2P56377 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
AP1S2P56377 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.86■□□□□ 0.93
AP1S2P56377 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.86■□□□□ 0.93
AP1S2P56377 AC005837.3-201ENST00000612163 286 ntBASIC20.86■□□□□ 0.93
AP1S2P56377 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
AP1S2P56377 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.86■□□□□ 0.93
AP1S2P56377 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms