Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CASP6P55212 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CASP6P55212 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CASP6P55212 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASP6P55212 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CASP6P55212 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.25■□□□□ 0.67
CASP6P55212 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASP6P55212 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CASP6P55212 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CASP6P55212 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.25■□□□□ 0.67
CASP6P55212 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CASP6P55212 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASP6P55212 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CASP6P55212 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CASP6P55212 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CASP6P55212 AC004812.2-201ENST00000611079 2094 ntBASIC19.25■□□□□ 0.67
CASP6P55212 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CASP6P55212 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.25■□□□□ 0.67
CASP6P55212 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CASP6P55212 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.25■□□□□ 0.67
CASP6P55212 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.25■□□□□ 0.67
CASP6P55212 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASP6P55212 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASP6P55212 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASP6P55212 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASP6P55212 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASP6P55212 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASP6P55212 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASP6P55212 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.25■□□□□ 0.67
CASP6P55212 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CASP6P55212 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CASP6P55212 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.24■□□□□ 0.67
CASP6P55212 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CASP6P55212 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.24■□□□□ 0.67
CASP6P55212 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.24■□□□□ 0.67
CASP6P55212 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CASP6P55212 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.24■□□□□ 0.67
CASP6P55212 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.24■□□□□ 0.67
CASP6P55212 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CASP6P55212 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CASP6P55212 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.24■□□□□ 0.67
CASP6P55212 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CASP6P55212 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CASP6P55212 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CASP6P55212 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CASP6P55212 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CASP6P55212 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.23■□□□□ 0.67
CASP6P55212 AF201337.1-201ENST00000520239 748 ntBASIC19.23■□□□□ 0.67
CASP6P55212 KRT18P20-201ENST00000548986 1279 ntBASIC19.23■□□□□ 0.67
CASP6P55212 KRT18P6-201ENST00000555540 1265 ntBASIC19.23■□□□□ 0.67
CASP6P55212 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.23■□□□□ 0.67
CASP6P55212 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.23■□□□□ 0.67
CASP6P55212 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CASP6P55212 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CASP6P55212 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CASP6P55212 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CASP6P55212 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASP6P55212 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CASP6P55212 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
CASP6P55212 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASP6P55212 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.22■□□□□ 0.67
CASP6P55212 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CASP6P55212 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CASP6P55212 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.22■□□□□ 0.67
CASP6P55212 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASP6P55212 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.22■□□□□ 0.67
CASP6P55212 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASP6P55212 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASP6P55212 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
CASP6P55212 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.22■□□□□ 0.67
CASP6P55212 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CASP6P55212 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASP6P55212 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASP6P55212 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.21■□□□□ 0.67
CASP6P55212 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASP6P55212 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASP6P55212 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASP6P55212 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CASP6P55212 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CASP6P55212 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.21■□□□□ 0.67
CASP6P55212 FAM201B-201ENST00000458407 597 ntBASIC19.21■□□□□ 0.67
CASP6P55212 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CASP6P55212 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.21■□□□□ 0.67
CASP6P55212 AL034346.1-201ENST00000568244 1277 ntBASIC19.21■□□□□ 0.67
CASP6P55212 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CASP6P55212 AL050303.2-201ENST00000619798 666 ntBASIC19.21■□□□□ 0.67
CASP6P55212 AC133041.1-202ENST00000642053 222 ntBASIC19.21■□□□□ 0.67
CASP6P55212 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.21■□□□□ 0.67
CASP6P55212 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CASP6P55212 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CASP6P55212 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CASP6P55212 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CASP6P55212 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CASP6P55212 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CASP6P55212 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CASP6P55212 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CASP6P55212 TSPY20P-201ENST00000450910 630 ntBASIC19.2■□□□□ 0.66
CASP6P55212 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CASP6P55212 SLC7A5P2-201ENST00000553010 536 ntBASIC19.2■□□□□ 0.66
CASP6P55212 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms