Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ATP1B3P54709 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP1B3P54709 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.55■□□□□ 0.56
ATP1B3P54709 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.55■□□□□ 0.56
ATP1B3P54709 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
ATP1B3P54709 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.55■□□□□ 0.56
ATP1B3P54709 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP1B3P54709 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATP1B3P54709 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.54■□□□□ 0.56
ATP1B3P54709 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP1B3P54709 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP1B3P54709 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATP1B3P54709 AC079089.2-201ENST00000531211 1277 ntBASIC18.54■□□□□ 0.56
ATP1B3P54709 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.54■□□□□ 0.56
ATP1B3P54709 MIR3181-201ENST00000578512 73 ntBASIC18.54■□□□□ 0.56
ATP1B3P54709 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
ATP1B3P54709 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP1B3P54709 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP1B3P54709 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ATP1B3P54709 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATP1B3P54709 AC026310.3-201ENST00000625186 2373 ntBASIC18.54■□□□□ 0.56
ATP1B3P54709 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.53■□□□□ 0.56
ATP1B3P54709 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
ATP1B3P54709 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
ATP1B3P54709 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATP1B3P54709 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP1B3P54709 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
ATP1B3P54709 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP1B3P54709 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
ATP1B3P54709 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.53■□□□□ 0.56
ATP1B3P54709 AC087239.1-201ENST00000622671 572 ntBASIC18.53■□□□□ 0.56
ATP1B3P54709 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.53■□□□□ 0.56
ATP1B3P54709 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP1B3P54709 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP1B3P54709 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP1B3P54709 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.53■□□□□ 0.56
ATP1B3P54709 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATP1B3P54709 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.53■□□□□ 0.56
ATP1B3P54709 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
ATP1B3P54709 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP1B3P54709 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP1B3P54709 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATP1B3P54709 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ATP1B3P54709 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.53■□□□□ 0.56
ATP1B3P54709 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.53■□□□□ 0.56
ATP1B3P54709 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP1B3P54709 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP1B3P54709 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP1B3P54709 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP1B3P54709 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ATP1B3P54709 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.52■□□□□ 0.56
ATP1B3P54709 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
ATP1B3P54709 AL121603.2-201ENST00000557373 2117 ntBASIC18.52■□□□□ 0.56
ATP1B3P54709 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.52■□□□□ 0.56
ATP1B3P54709 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP1B3P54709 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.52■□□□□ 0.56
ATP1B3P54709 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
ATP1B3P54709 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.52■□□□□ 0.56
ATP1B3P54709 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATP1B3P54709 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.52■□□□□ 0.56
ATP1B3P54709 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP1B3P54709 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.52■□□□□ 0.56
ATP1B3P54709 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP1B3P54709 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.52■□□□□ 0.56
ATP1B3P54709 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATP1B3P54709 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
ATP1B3P54709 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.55
ATP1B3P54709 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP1B3P54709 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP1B3P54709 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.51■□□□□ 0.55
ATP1B3P54709 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP1B3P54709 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.51■□□□□ 0.55
ATP1B3P54709 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP1B3P54709 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP1B3P54709 AL356441.2-201ENST00000443009 864 ntBASIC18.51■□□□□ 0.55
ATP1B3P54709 OR2I1P-207ENST00000453522 948 ntBASIC18.51■□□□□ 0.55
ATP1B3P54709 AL512631.2-201ENST00000604634 923 ntBASIC18.51■□□□□ 0.55
ATP1B3P54709 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP1B3P54709 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.51■□□□□ 0.55
ATP1B3P54709 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.51■□□□□ 0.55
ATP1B3P54709 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP1B3P54709 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP1B3P54709 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP1B3P54709 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP1B3P54709 AC010542.4-201ENST00000563151 1910 ntBASIC18.51■□□□□ 0.55
ATP1B3P54709 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.5■□□□□ 0.55
ATP1B3P54709 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATP1B3P54709 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.5■□□□□ 0.55
ATP1B3P54709 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATP1B3P54709 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP1B3P54709 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.5■□□□□ 0.55
ATP1B3P54709 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.5■□□□□ 0.55
ATP1B3P54709 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP1B3P54709 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP1B3P54709 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ATP1B3P54709 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.5■□□□□ 0.55
ATP1B3P54709 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.5■□□□□ 0.55
ATP1B3P54709 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP1B3P54709 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP1B3P54709 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms