Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN2P51788 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN2P51788 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN2P51788 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.71■□□□□ 0.91
CLCN2P51788 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN2P51788 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CLCN2P51788 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN2P51788 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CLCN2P51788 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN2P51788 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.7■□□□□ 0.9
CLCN2P51788 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN2P51788 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN2P51788 SUDS3P1-201ENST00000505831 966 ntBASIC20.7■□□□□ 0.9
CLCN2P51788 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.7■□□□□ 0.9
CLCN2P51788 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN2P51788 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.7■□□□□ 0.9
CLCN2P51788 AL499627.2-201ENST00000606283 725 ntBASIC20.7■□□□□ 0.9
CLCN2P51788 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CLCN2P51788 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CLCN2P51788 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN2P51788 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.7■□□□□ 0.9
CLCN2P51788 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CLCN2P51788 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN2P51788 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN2P51788 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CLCN2P51788 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CLCN2P51788 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN2P51788 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN2P51788 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN2P51788 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.69■□□□□ 0.9
CLCN2P51788 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN2P51788 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN2P51788 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN2P51788 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN2P51788 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.69■□□□□ 0.9
CLCN2P51788 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.69■□□□□ 0.9
CLCN2P51788 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN2P51788 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CLCN2P51788 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CLCN2P51788 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CLCN2P51788 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN2P51788 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN2P51788 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.68■□□□□ 0.9
CLCN2P51788 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN2P51788 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.68■□□□□ 0.9
CLCN2P51788 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.68■□□□□ 0.9
CLCN2P51788 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN2P51788 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN2P51788 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CLCN2P51788 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN2P51788 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN2P51788 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.67■□□□□ 0.9
CLCN2P51788 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN2P51788 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN2P51788 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN2P51788 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN2P51788 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.67■□□□□ 0.9
CLCN2P51788 AP001330.3-201ENST00000520123 633 ntBASIC20.67■□□□□ 0.9
CLCN2P51788 AF213884.3-201ENST00000563833 479 ntBASIC20.67■□□□□ 0.9
CLCN2P51788 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.67■□□□□ 0.9
CLCN2P51788 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
CLCN2P51788 AC133637.1-201ENST00000624115 1537 ntBASIC20.67■□□□□ 0.9
CLCN2P51788 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN2P51788 PKD1P6-201ENST00000343738 4769 ntBASIC20.67■□□□□ 0.9
CLCN2P51788 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN2P51788 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CLCN2P51788 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.67■□□□□ 0.9
CLCN2P51788 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.67■□□□□ 0.9
CLCN2P51788 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN2P51788 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN2P51788 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN2P51788 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN2P51788 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CLCN2P51788 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN2P51788 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN2P51788 FAM99A-202ENST00000538190 1989 ntBASIC20.66■□□□□ 0.9
CLCN2P51788 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CLCN2P51788 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN2P51788 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN2P51788 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.65■□□□□ 0.9
CLCN2P51788 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN2P51788 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.65■□□□□ 0.9
CLCN2P51788 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN2P51788 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN2P51788 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN2P51788 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.65■□□□□ 0.9
CLCN2P51788 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.65■□□□□ 0.9
CLCN2P51788 MIR939-201ENST00000401314 82 ntBASIC20.65■□□□□ 0.9
CLCN2P51788 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.65■□□□□ 0.9
CLCN2P51788 AC091305.1-201ENST00000479476 895 ntBASIC20.65■□□□□ 0.9
CLCN2P51788 AC027682.1-201ENST00000562846 899 ntBASIC20.65■□□□□ 0.9
CLCN2P51788 AL136967.2-201ENST00000623968 743 ntBASIC20.65■□□□□ 0.9
CLCN2P51788 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN2P51788 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN2P51788 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.65■□□□□ 0.9
CLCN2P51788 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN2P51788 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN2P51788 AC080038.3-201ENST00000623346 1952 ntBASIC20.65■□□□□ 0.9
CLCN2P51788 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.64■□□□□ 0.9
CLCN2P51788 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms