Protein–RNA interactions for Protein: P38902

RPB11, DNA-directed RNA polymerase II subunit RPB11, yeastyeast

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB11P38902 MOB2YFL034C-B 864 nt2.35□□□□□ -2.03
RPB11P38902 GTF1YGR102C 552 nt2.35□□□□□ -2.03
RPB11P38902 tQ(UUG)BtQ(UUG)B 72 nt2.35□□□□□ -2.03
RPB11P38902 YLR297WYLR297W 390 nt2.35□□□□□ -2.03
RPB11P38902 CSM3YMR048W 954 nt2.35□□□□□ -2.03
RPB11P38902 AAR2YBL074C 1068 nt2.35□□□□□ -2.03
RPB11P38902 YOR385WYOR385W 873 nt2.35□□□□□ -2.03
RPB11P38902 NUM1YDR150W 8247 nt2.35□□□□□ -2.03
RPB11P38902 MYO5YMR109W 3660 nt2.35□□□□□ -2.03
RPB11P38902 PRP31YGR091W 1485 nt2.34□□□□□ -2.03
RPB11P38902 ESC1YMR219W 4977 nt2.34□□□□□ -2.03
RPB11P38902 SKT5YBL061C 2091 nt2.34□□□□□ -2.03
RPB11P38902 ERP3YDL018C 678 nt2.34□□□□□ -2.03
RPB11P38902 HAT2YEL056W 1206 nt2.34□□□□□ -2.03
RPB11P38902 tK(UUU)DtK(UUU)D 73 nt2.34□□□□□ -2.03
RPB11P38902 tK(UUU)G1tK(UUU)G1 73 nt2.34□□□□□ -2.03
RPB11P38902 tK(UUU)G2tK(UUU)G2 73 nt2.34□□□□□ -2.03
RPB11P38902 tK(UUU)KtK(UUU)K 73 nt2.34□□□□□ -2.03
RPB11P38902 tK(UUU)LtK(UUU)L 73 nt2.34□□□□□ -2.03
RPB11P38902 tK(UUU)OtK(UUU)O 73 nt2.34□□□□□ -2.03
RPB11P38902 tK(UUU)PtK(UUU)P 73 nt2.34□□□□□ -2.03
RPB11P38902 PXR1YGR280C 816 nt2.34□□□□□ -2.03
RPB11P38902 AIM26YKL037W 357 nt2.34□□□□□ -2.03
RPB11P38902 YGR027W-BYGR027W-B 5268 nt2.34□□□□□ -2.03
RPB11P38902 YLR227W-BYLR227W-B 5268 nt2.34□□□□□ -2.03
RPB11P38902 YPR158C-DYPR158C-D 5268 nt2.34□□□□□ -2.03
RPB11P38902 AKR1YDR264C 2295 nt2.34□□□□□ -2.04
RPB11P38902 NSA1YGL111W 1392 nt2.34□□□□□ -2.04
RPB11P38902 ARH1YDR376W 1482 nt2.33□□□□□ -2.04
RPB11P38902 STE6YKL209C 3873 nt2.33□□□□□ -2.04
RPB11P38902 NMD2YHR077C 3270 nt2.33□□□□□ -2.04
RPB11P38902 FIN1YDR130C 876 nt2.33□□□□□ -2.04
RPB11P38902 THP2YHR167W 786 nt2.33□□□□□ -2.04
RPB11P38902 PPX1YHR201C 1194 nt2.33□□□□□ -2.04
RPB11P38902 YIL174WYIL174W 228 nt2.33□□□□□ -2.04
RPB11P38902 YJL222W-AYJL222W-A 228 nt2.33□□□□□ -2.04
RPB11P38902 ATG17YLR423C 1254 nt2.33□□□□□ -2.04
RPB11P38902 RSF1YMR030W 1131 nt2.33□□□□□ -2.04
RPB11P38902 REC114YMR133W 1287 nt2.33□□□□□ -2.04
RPB11P38902 ATP11YNL315C 957 nt2.33□□□□□ -2.04
RPB11P38902 RAS1YOR101W 930 nt2.33□□□□□ -2.04
RPB11P38902 MMS1YPR164W 4224 nt2.33□□□□□ -2.04
RPB11P38902 JSN1YJR091C 3276 nt2.32□□□□□ -2.04
RPB11P38902 MDM1YML104C 3384 nt2.32□□□□□ -2.04
RPB11P38902 YTA7YGR270W 4140 nt2.32□□□□□ -2.04
RPB11P38902 GYP7YDL234C 2241 nt2.32□□□□□ -2.04
RPB11P38902 NTO1YPR031W 2247 nt2.32□□□□□ -2.04
RPB11P38902 ENT5YDR153C 1236 nt2.32□□□□□ -2.04
RPB11P38902 RPB7YDR404C 516 nt2.32□□□□□ -2.04
RPB11P38902 RPL1BYGL135W 654 nt2.32□□□□□ -2.04
RPB11P38902 ERV29YGR284C 933 nt2.32□□□□□ -2.04
RPB11P38902 RPL1AYPL220W 654 nt2.32□□□□□ -2.04
RPB11P38902 TOM70YNL121C 1854 nt2.32□□□□□ -2.04
RPB11P38902 EPL1YFL024C 2499 nt2.32□□□□□ -2.04
RPB11P38902 YDR098C-BYDR098C-B 5268 nt2.32□□□□□ -2.04
RPB11P38902 YDR210C-DYDR210C-D 5268 nt2.32□□□□□ -2.04
RPB11P38902 YDR316W-BYDR316W-B 5268 nt2.32□□□□□ -2.04
RPB11P38902 YDR365W-BYDR365W-B 5268 nt2.32□□□□□ -2.04
RPB11P38902 YER138CYER138C 5268 nt2.32□□□□□ -2.04
RPB11P38902 YER160CYER160C 5268 nt2.32□□□□□ -2.04
RPB11P38902 YGR038C-BYGR038C-B 5268 nt2.32□□□□□ -2.04
RPB11P38902 YGR161C-DYGR161C-D 5268 nt2.32□□□□□ -2.04
RPB11P38902 YJR027WYJR027W 5268 nt2.32□□□□□ -2.04
RPB11P38902 YLR157C-BYLR157C-B 5268 nt2.32□□□□□ -2.04
RPB11P38902 YML039WYML039W 5268 nt2.32□□□□□ -2.04
RPB11P38902 YML045WYML045W 5268 nt2.32□□□□□ -2.04
RPB11P38902 YMR050CYMR050C 5268 nt2.32□□□□□ -2.04
RPB11P38902 YOL103W-BYOL103W-B 5268 nt2.32□□□□□ -2.04
RPB11P38902 YBR012W-BYBR012W-B 5271 nt2.32□□□□□ -2.04
RPB11P38902 YOR142W-BYOR142W-B 5268 nt2.32□□□□□ -2.04
RPB11P38902 YPL257W-BYPL257W-B 5268 nt2.32□□□□□ -2.04
RPB11P38902 YPR158W-BYPR158W-B 5271 nt2.32□□□□□ -2.04
RPB11P38902 ADY4YLR227C 1482 nt2.32□□□□□ -2.04
RPB11P38902 YPK3YBR028C 1578 nt2.32□□□□□ -2.04
RPB11P38902 RPL27AYHR010W 411 nt2.31□□□□□ -2.04
RPB11P38902 PAN5YHR063C 1140 nt2.31□□□□□ -2.04
RPB11P38902 REC102YLR329W 795 nt2.31□□□□□ -2.04
RPB11P38902 YLR416CYLR416C 399 nt2.31□□□□□ -2.04
RPB11P38902 RLP7YNL002C 969 nt2.31□□□□□ -2.04
RPB11P38902 IMP4YNL075W 873 nt2.31□□□□□ -2.04
RPB11P38902 MCA1YOR197W 1299 nt2.31□□□□□ -2.04
RPB11P38902 LCL1YPL056C 306 nt2.31□□□□□ -2.04
RPB11P38902 ECM21YBL101C 3354 nt2.3□□□□□ -2.04
RPB11P38902 YCR085WYCR085W 354 nt2.3□□□□□ -2.04
RPB11P38902 YDR209CYDR209C 414 nt2.3□□□□□ -2.04
RPB11P38902 RRP17YDR412W 708 nt2.3□□□□□ -2.04
RPB11P38902 COS8YHL048W 1146 nt2.3□□□□□ -2.04
RPB11P38902 YIL047C-AYIL047C-A 369 nt2.3□□□□□ -2.04
RPB11P38902 MRS3YJL133W 945 nt2.3□□□□□ -2.04
RPB11P38902 ENV10YLR065C 546 nt2.3□□□□□ -2.04
RPB11P38902 HHF2YNL030W 312 nt2.3□□□□□ -2.04
RPB11P38902 AFT2YPL202C 1251 nt2.3□□□□□ -2.04
RPB11P38902 YPR027CYPR027C 834 nt2.3□□□□□ -2.04
RPB11P38902 GAS2YLR343W 1668 nt2.3□□□□□ -2.04
RPB11P38902 TCM62YBR044C 1719 nt2.3□□□□□ -2.04
RPB11P38902 BEM4YPL161C 1902 nt2.3□□□□□ -2.04
RPB11P38902 MSH2YOL090W 2895 nt2.29□□□□□ -2.04
RPB11P38902 HEH2YDR458C 1992 nt2.29□□□□□ -2.04
RPB11P38902 MRH1YDR033W 963 nt2.29□□□□□ -2.04
RPB11P38902 YDR491CYDR491C 492 nt2.29□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 17.7 ms