Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CKS2P33552 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC15.76■□□□□ 0.11
CKS2P33552 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CKS2P33552 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CKS2P33552 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CKS2P33552 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CKS2P33552 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CKS2P33552 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CKS2P33552 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CKS2P33552 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CKS2P33552 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC15.75■□□□□ 0.11
CKS2P33552 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CKS2P33552 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CKS2P33552 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC15.75■□□□□ 0.11
CKS2P33552 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC15.75■□□□□ 0.11
CKS2P33552 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CKS2P33552 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CKS2P33552 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CKS2P33552 LINC01529-204ENST00000636474 1715 ntBASIC15.75■□□□□ 0.11
CKS2P33552 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CKS2P33552 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CKS2P33552 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CKS2P33552 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CKS2P33552 AC004448.1-201ENST00000458332 883 ntBASIC15.75■□□□□ 0.11
CKS2P33552 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CKS2P33552 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
CKS2P33552 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CKS2P33552 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CKS2P33552 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC15.75■□□□□ 0.11
CKS2P33552 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKS2P33552 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKS2P33552 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKS2P33552 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
CKS2P33552 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CKS2P33552 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC15.74■□□□□ 0.11
CKS2P33552 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
CKS2P33552 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CKS2P33552 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC15.74■□□□□ 0.11
CKS2P33552 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CKS2P33552 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKS2P33552 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC15.74■□□□□ 0.11
CKS2P33552 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CKS2P33552 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKS2P33552 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKS2P33552 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKS2P33552 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CKS2P33552 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CKS2P33552 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CKS2P33552 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC15.74■□□□□ 0.11
CKS2P33552 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKS2P33552 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CKS2P33552 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CKS2P33552 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CKS2P33552 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CKS2P33552 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC15.73■□□□□ 0.11
CKS2P33552 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
CKS2P33552 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CKS2P33552 AL592293.1-201ENST00000502889 1188 ntBASIC15.73■□□□□ 0.11
CKS2P33552 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CKS2P33552 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CKS2P33552 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CKS2P33552 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC15.73■□□□□ 0.11
CKS2P33552 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
CKS2P33552 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC15.73■□□□□ 0.11
CKS2P33552 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC15.73■□□□□ 0.11
CKS2P33552 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CKS2P33552 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC15.73■□□□□ 0.11
CKS2P33552 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CKS2P33552 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CKS2P33552 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CKS2P33552 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.72■□□□□ 0.11
CKS2P33552 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CKS2P33552 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CKS2P33552 LINC01006-201ENST00000333319 2292 ntBASIC15.72■□□□□ 0.11
CKS2P33552 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CKS2P33552 GPX1-201ENST00000419349 1106 ntBASIC15.72■□□□□ 0.11
CKS2P33552 AC022616.5-201ENST00000518796 181 ntBASIC15.72■□□□□ 0.11
CKS2P33552 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CKS2P33552 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CKS2P33552 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CKS2P33552 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CKS2P33552 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CKS2P33552 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CKS2P33552 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CKS2P33552 RNF165-205ENST00000588679 2904 ntBASIC15.71■□□□□ 0.11
CKS2P33552 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CKS2P33552 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CKS2P33552 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC15.71■□□□□ 0.11
CKS2P33552 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CKS2P33552 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC15.71■□□□□ 0.11
CKS2P33552 MIR639-201ENST00000384974 98 ntBASIC15.71■□□□□ 0.11
CKS2P33552 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CKS2P33552 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CKS2P33552 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CKS2P33552 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CKS2P33552 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC15.71■□□□□ 0.11
CKS2P33552 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CKS2P33552 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CKS2P33552 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
CKS2P33552 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms