Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 NGG1YDR176W 2109 nt4.84□□□□□ -1.63
PUB1P32588 UBX2YML013W 1755 nt4.84□□□□□ -1.63 RIP-Chip
PUB1P32588 DAK1YML070W 1755 nt4.84□□□□□ -1.63
PUB1P32588 BDP1YNL039W 1785 nt4.84□□□□□ -1.63
PUB1P32588 NMD3YHR170W 1557 nt4.84□□□□□ -1.63
PUB1P32588 YDL187CYDL187C 330 nt4.84□□□□□ -1.63
PUB1P32588 YER107W-AYER107W-A 321 nt4.84□□□□□ -1.63
PUB1P32588 MIG2YGL209W 1149 nt4.84□□□□□ -1.63 RIP-Chip
PUB1P32588 SPL2YHR136C 447 nt4.84□□□□□ -1.63
PUB1P32588 YKL151CYKL151C 1014 nt4.84□□□□□ -1.63
PUB1P32588 RPS19BYNL302C 435 nt4.84□□□□□ -1.63
PUB1P32588 MRP21YBL090W 534 nt4.84□□□□□ -1.63 RIP-Chip
PUB1P32588 YNR034W-AYNR034W-A 297 nt4.84□□□□□ -1.63
PUB1P32588 YBR056W-AYBR056W-A 201 nt4.84□□□□□ -1.63 RIP-Chip
PUB1P32588 SEC18YBR080C 2277 nt4.84□□□□□ -1.64
PUB1P32588 TRP5YGL026C 2124 nt4.84□□□□□ -1.64
PUB1P32588 RGT1YKL038W 3513 nt4.84□□□□□ -1.64
PUB1P32588 YIL067CYIL067C 2037 nt4.84□□□□□ -1.64
PUB1P32588 YFL034WYFL034W 3222 nt4.84□□□□□ -1.64
PUB1P32588 AFR1YDR085C 1863 nt4.83□□□□□ -1.64
PUB1P32588 ERG5YMR015C 1617 nt4.83□□□□□ -1.64 RIP-Chip
PUB1P32588 SEN54YPL083C 1404 nt4.83□□□□□ -1.64
PUB1P32588 HES1YOR237W 1305 nt4.83□□□□□ -1.64
PUB1P32588 TVP15YDR100W 432 nt4.83□□□□□ -1.64 RIP-Chip
PUB1P32588 NCB2YDR397C 441 nt4.83□□□□□ -1.64
PUB1P32588 RPL12AYEL054C 498 nt4.83□□□□□ -1.64 RIP-Chip
PUB1P32588 ENP2YGR145W 2124 nt4.83□□□□□ -1.64
PUB1P32588 QCR10YHR001W-A 234 nt4.83□□□□□ -1.64 RIP-Chip
PUB1P32588 YIR036W-AYIR036W-A 402 nt4.83□□□□□ -1.64
PUB1P32588 YJL175WYJL175W 513 nt4.83□□□□□ -1.64
PUB1P32588 MRP17YKL003C 396 nt4.83□□□□□ -1.64
PUB1P32588 PAU17YLL025W 375 nt4.83□□□□□ -1.64
PUB1P32588 YNG1YOR064C 660 nt4.83□□□□□ -1.64
PUB1P32588 APD1YBR151W 951 nt4.83□□□□□ -1.64
PUB1P32588 TEL2YGR099W 2067 nt4.83□□□□□ -1.64
PUB1P32588 MKC7YDR144C 1791 nt4.83□□□□□ -1.64
PUB1P32588 PCS60YBR222C 1632 nt4.83□□□□□ -1.64
PUB1P32588 THR4YCR053W 1545 nt4.82□□□□□ -1.64 RIP-Chip
PUB1P32588 TIP20YGL145W 2106 nt4.82□□□□□ -1.64
PUB1P32588 SIT1YEL065W 1887 nt4.82□□□□□ -1.64 RIP-Chip
PUB1P32588 BIK1YCL029C 1323 nt4.82□□□□□ -1.64
PUB1P32588 XKS1YGR194C 1803 nt4.82□□□□□ -1.64
PUB1P32588 BUD13YGL174W 801 nt4.82□□□□□ -1.64
PUB1P32588 YLR050CYLR050C 486 nt4.82□□□□□ -1.64 RIP-Chip
PUB1P32588 OCA2YNL056W 594 nt4.82□□□□□ -1.64
PUB1P32588 CIN5YOR028C 888 nt4.82□□□□□ -1.64
PUB1P32588 NSL1YPL233W 651 nt4.82□□□□□ -1.64
PUB1P32588 KIP2YPL155C 2121 nt4.82□□□□□ -1.64
PUB1P32588 BIT2YBR270C 1638 nt4.82□□□□□ -1.64
PUB1P32588 SST2YLR452C 2097 nt4.82□□□□□ -1.64 RIP-Chip
PUB1P32588 MUD2YKL074C 1584 nt4.82□□□□□ -1.64
PUB1P32588 TFB2YPL122C 1542 nt4.82□□□□□ -1.64
PUB1P32588 SDA1YGR245C 2304 nt4.81□□□□□ -1.64
PUB1P32588 FMP30YPL103C 1407 nt4.81□□□□□ -1.64
PUB1P32588 IRS4YKR019C 1848 nt4.81□□□□□ -1.64
PUB1P32588 HXT4YHR092C 1731 nt4.81□□□□□ -1.64
PUB1P32588 SUB2YDL084W 1341 nt4.81□□□□□ -1.64
PUB1P32588 CET1YPL228W 1650 nt4.81□□□□□ -1.64
PUB1P32588 GDB1YPR184W 4611 nt4.81□□□□□ -1.64 RIP-Chip
PUB1P32588 NHP2YDL208W 471 nt4.81□□□□□ -1.64
PUB1P32588 tN(GUU)CtN(GUU)C 74 nt4.81□□□□□ -1.64
PUB1P32588 tN(GUU)FtN(GUU)F 74 nt4.81□□□□□ -1.64
PUB1P32588 tN(GUU)GtN(GUU)G 74 nt4.81□□□□□ -1.64
PUB1P32588 tN(GUU)KtN(GUU)K 74 nt4.81□□□□□ -1.64
PUB1P32588 tN(GUU)LtN(GUU)L 74 nt4.81□□□□□ -1.64
PUB1P32588 tN(GUU)N1tN(GUU)N1 74 nt4.81□□□□□ -1.64
PUB1P32588 tN(GUU)N2tN(GUU)N2 74 nt4.81□□□□□ -1.64
PUB1P32588 tN(GUU)O1tN(GUU)O1 74 nt4.81□□□□□ -1.64
PUB1P32588 tN(GUU)O2tN(GUU)O2 74 nt4.81□□□□□ -1.64
PUB1P32588 tN(GUU)PtN(GUU)P 74 nt4.81□□□□□ -1.64
PUB1P32588 YGR121W-AYGR121W-A 216 nt4.81□□□□□ -1.64
PUB1P32588 YHR063W-AYHR063W-A 336 nt4.81□□□□□ -1.64
PUB1P32588 MRPL31YKL138C 396 nt4.81□□□□□ -1.64
PUB1P32588 YMR315WYMR315W 1050 nt4.81□□□□□ -1.64
PUB1P32588 PDR17YNL264C 1053 nt4.81□□□□□ -1.64 RIP-Chip
PUB1P32588 YNR075C-AYNR075C-A 93 nt4.81□□□□□ -1.64
PUB1P32588 YPR170CYPR170C 336 nt4.81□□□□□ -1.64
PUB1P32588 MSS1YMR023C 1581 nt4.8□□□□□ -1.64
PUB1P32588 SRD1YCR018C 666 nt4.8□□□□□ -1.64 RIP-Chip
PUB1P32588 COX26YDR119W-A 201 nt4.8□□□□□ -1.64
PUB1P32588 UBC8YEL012W 657 nt4.8□□□□□ -1.64
PUB1P32588 YFR034W-AYFR034W-A 288 nt4.8□□□□□ -1.64
PUB1P32588 CBP4YGR174C 513 nt4.8□□□□□ -1.64
PUB1P32588 PCL5YHR071W 690 nt4.8□□□□□ -1.64 RIP-Chip
PUB1P32588 YJR079WYJR079W 330 nt4.8□□□□□ -1.64
PUB1P32588 ECM4YKR076W 1113 nt4.8□□□□□ -1.64
PUB1P32588 YAR029WYAR029W 225 nt4.8□□□□□ -1.64
PUB1P32588 TAX4YJL083W 1815 nt4.8□□□□□ -1.64 RIP-Chip
PUB1P32588 GLT1YDL171C 6438 nt4.8□□□□□ -1.64 RIP-Chip
PUB1P32588 YKR078WYKR078W 1758 nt4.8□□□□□ -1.64
PUB1P32588 ALT1YLR089C 1779 nt4.8□□□□□ -1.64 RIP-Chip
PUB1P32588 VMA13YPR036W 1437 nt4.8□□□□□ -1.64
PUB1P32588 YHR045WYHR045W 1683 nt4.8□□□□□ -1.64 RIP-Chip
PUB1P32588 FAR8YMR029C 1572 nt4.79□□□□□ -1.64
PUB1P32588 OSH6YKR003W 1347 nt4.79□□□□□ -1.64 RIP-Chip
PUB1P32588 ASA1YPR085C 1332 nt4.79□□□□□ -1.64
PUB1P32588 IFM1YOL023W 2031 nt4.79□□□□□ -1.64
PUB1P32588 ADY2YCR010C 852 nt4.79□□□□□ -1.64
PUB1P32588 YGR022CYGR022C 330 nt4.79□□□□□ -1.64
PUB1P32588 YGR107WYGR107W 450 nt4.79□□□□□ -1.64
Retrieved 100 of 7,029 protein–RNA pairs in 23 ms