Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.39■□□□□ 0.85
PTPN6P29350 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.39■□□□□ 0.85
PTPN6P29350 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN6P29350 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.39■□□□□ 0.85
PTPN6P29350 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN6P29350 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN6P29350 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
PTPN6P29350 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.38■□□□□ 0.85
PTPN6P29350 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.38■□□□□ 0.85
PTPN6P29350 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN6P29350 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN6P29350 Z98882.1-201ENST00000622160 2253 ntBASIC20.38■□□□□ 0.85
PTPN6P29350 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN6P29350 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.38■□□□□ 0.85
PTPN6P29350 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN6P29350 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN6P29350 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.38■□□□□ 0.85
PTPN6P29350 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN6P29350 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.37■□□□□ 0.85
PTPN6P29350 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PTPN6P29350 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN6P29350 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN6P29350 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN6P29350 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PTPN6P29350 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.37■□□□□ 0.85
PTPN6P29350 AL138724.1-201ENST00000606771 1088 ntBASIC20.37■□□□□ 0.85
PTPN6P29350 pRNA.6-201ENST00000610482 90 ntBASIC20.37■□□□□ 0.85
PTPN6P29350 pRNA.5-201ENST00000612139 90 ntBASIC20.37■□□□□ 0.85
PTPN6P29350 pRNA.11-201ENST00000618423 90 ntBASIC20.37■□□□□ 0.85
PTPN6P29350 pRNA.13-201ENST00000619112 90 ntBASIC20.37■□□□□ 0.85
PTPN6P29350 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.37■□□□□ 0.85
PTPN6P29350 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN6P29350 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.37■□□□□ 0.85
PTPN6P29350 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.37■□□□□ 0.85
PTPN6P29350 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
PTPN6P29350 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN6P29350 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN6P29350 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN6P29350 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN6P29350 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.37■□□□□ 0.85
PTPN6P29350 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN6P29350 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN6P29350 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.36■□□□□ 0.85
PTPN6P29350 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN6P29350 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN6P29350 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
PTPN6P29350 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN6P29350 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.36■□□□□ 0.85
PTPN6P29350 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN6P29350 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN6P29350 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN6P29350 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN6P29350 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN6P29350 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN6P29350 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.35■□□□□ 0.85
PTPN6P29350 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
PTPN6P29350 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN6P29350 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN6P29350 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.35■□□□□ 0.85
PTPN6P29350 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PTPN6P29350 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.35■□□□□ 0.85
PTPN6P29350 AC011298.3-201ENST00000615796 283 ntBASIC20.35■□□□□ 0.85
PTPN6P29350 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.35■□□□□ 0.85
PTPN6P29350 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN6P29350 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN6P29350 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN6P29350 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PTPN6P29350 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN6P29350 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.34■□□□□ 0.85
PTPN6P29350 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.34■□□□□ 0.85
PTPN6P29350 MIR3181-201ENST00000578512 73 ntBASIC20.34■□□□□ 0.85
PTPN6P29350 AC005837.3-201ENST00000612163 286 ntBASIC20.34■□□□□ 0.85
PTPN6P29350 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.34■□□□□ 0.85
PTPN6P29350 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN6P29350 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN6P29350 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.34■□□□□ 0.85
PTPN6P29350 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.34■□□□□ 0.85
PTPN6P29350 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.34■□□□□ 0.85
PTPN6P29350 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTPN6P29350 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
PTPN6P29350 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.33■□□□□ 0.85
PTPN6P29350 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PTPN6P29350 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PTPN6P29350 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PTPN6P29350 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PTPN6P29350 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN6P29350 AC019069.1-201ENST00000610008 1333 ntBASIC20.32■□□□□ 0.84
PTPN6P29350 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.32■□□□□ 0.84
PTPN6P29350 FEM1AP4-201ENST00000443167 1987 ntBASIC20.32■□□□□ 0.84
PTPN6P29350 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN6P29350 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN6P29350 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
PTPN6P29350 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN6P29350 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN6P29350 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.32■□□□□ 0.84
PTPN6P29350 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN6P29350 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN6P29350 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.32■□□□□ 0.84
PTPN6P29350 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PTPN6P29350 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms