Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.85■□□□□ 0.93
EPHA3P29320 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EPHA3P29320 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EPHA3P29320 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
EPHA3P29320 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
EPHA3P29320 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
EPHA3P29320 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EPHA3P29320 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
EPHA3P29320 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.85■□□□□ 0.93
EPHA3P29320 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EPHA3P29320 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
EPHA3P29320 AL031602.1-201ENST00000633169 911 ntBASIC20.85■□□□□ 0.93
EPHA3P29320 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
EPHA3P29320 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
EPHA3P29320 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EPHA3P29320 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
EPHA3P29320 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.85■□□□□ 0.93
EPHA3P29320 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.85■□□□□ 0.93
EPHA3P29320 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
EPHA3P29320 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.84■□□□□ 0.93
EPHA3P29320 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.84■□□□□ 0.93
EPHA3P29320 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
EPHA3P29320 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
EPHA3P29320 AC079089.2-201ENST00000531211 1277 ntBASIC20.84■□□□□ 0.93
EPHA3P29320 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
EPHA3P29320 AC010997.5-201ENST00000609182 354 ntBASIC20.84■□□□□ 0.93
EPHA3P29320 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.84■□□□□ 0.93
EPHA3P29320 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EPHA3P29320 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EPHA3P29320 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EPHA3P29320 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EPHA3P29320 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
EPHA3P29320 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
EPHA3P29320 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
EPHA3P29320 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
EPHA3P29320 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
EPHA3P29320 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
EPHA3P29320 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.83■□□□□ 0.93
EPHA3P29320 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
EPHA3P29320 MIR4787-201ENST00000607364 84 ntBASIC20.83■□□□□ 0.93
EPHA3P29320 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.83■□□□□ 0.93
EPHA3P29320 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
EPHA3P29320 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
EPHA3P29320 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.83■□□□□ 0.92
EPHA3P29320 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
EPHA3P29320 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.83■□□□□ 0.92
EPHA3P29320 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
EPHA3P29320 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.83■□□□□ 0.92
EPHA3P29320 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.83■□□□□ 0.92
EPHA3P29320 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EPHA3P29320 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
EPHA3P29320 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
EPHA3P29320 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EPHA3P29320 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
EPHA3P29320 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
EPHA3P29320 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
EPHA3P29320 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
EPHA3P29320 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
EPHA3P29320 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
EPHA3P29320 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.82■□□□□ 0.92
EPHA3P29320 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EPHA3P29320 Z92544.1-202ENST00000571933 1220 ntBASIC20.82■□□□□ 0.92
EPHA3P29320 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
EPHA3P29320 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EPHA3P29320 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EPHA3P29320 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.82■□□□□ 0.92
EPHA3P29320 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EPHA3P29320 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
EPHA3P29320 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EPHA3P29320 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
EPHA3P29320 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
EPHA3P29320 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
EPHA3P29320 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
EPHA3P29320 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.81■□□□□ 0.92
EPHA3P29320 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
EPHA3P29320 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
EPHA3P29320 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EPHA3P29320 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.81■□□□□ 0.92
EPHA3P29320 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.81■□□□□ 0.92
EPHA3P29320 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.81■□□□□ 0.92
EPHA3P29320 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
EPHA3P29320 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EPHA3P29320 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.81■□□□□ 0.92
EPHA3P29320 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
EPHA3P29320 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
EPHA3P29320 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.8■□□□□ 0.92
EPHA3P29320 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
EPHA3P29320 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
EPHA3P29320 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.8■□□□□ 0.92
EPHA3P29320 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
EPHA3P29320 AL121603.2-201ENST00000557373 2117 ntBASIC20.8■□□□□ 0.92
EPHA3P29320 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
EPHA3P29320 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
EPHA3P29320 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
EPHA3P29320 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
EPHA3P29320 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
EPHA3P29320 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
EPHA3P29320 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.8■□□□□ 0.92
EPHA3P29320 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.8■□□□□ 0.92
EPHA3P29320 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms